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[git/dials] master: Update scaling test with reminder to explore further. (481f7a138)
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Thu, 31 Jan 2019 16:53:39 +0000 |
93 lines |
[git/dials] master: Implement new reflection selection algorithm for scaling. (260c766c7)
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Thu, 31 Jan 2019 16:23:42 +0000 |
123 lines |
[git/dials] master: A little more info in a help message (2c0e35d9b)
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Thu, 31 Jan 2019 16:05:39 +0000 |
110 lines |
[git/dials] master: 🤷 (0030a2438)
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Thu, 31 Jan 2019 08:26:15 +0000 |
81 lines |
[git/dials] master: fix blosc installation failure (ed4e3da78)
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Thu, 31 Jan 2019 08:16:33 +0000 |
79 lines |
[git/dials] master: include msgpack in installer (ae0e829ee)
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Thu, 31 Jan 2019 08:12:52 +0000 |
79 lines |
[git/dials] master: halraiser as contextmanager (5c0d86142)
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Wed, 30 Jan 2019 12:17:37 +0000 |
138 lines |
[git/dials] master: Add blosc dependency, catch specific error (76337e20a)
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Wed, 30 Jan 2019 10:17:33 +0000 |
121 lines |
[git/dials] master: looks redundant, but don't touch this (b2cffcc1d)
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Wed, 30 Jan 2019 09:54:18 +0000 |
81 lines |
[git/dials] master: Merge branch 'msgpack_support' (364f3e95e)
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Wed, 30 Jan 2019 09:50:08 +0000 |
87 lines |
[git/dials] master: Update test_phil for experiment list changes (a71b0d075)
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Wed, 30 Jan 2019 09:49:50 +0000 |
165 lines |
[git/dials] master: Add msgpack python package dependency (9e0018c9d)
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Wed, 30 Jan 2019 09:49:50 +0000 |
93 lines |
[git/dials] master: Changed from except to except Exception (fda44900c)
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Tue, 29 Jan 2019 09:15:29 +0000 |
87 lines |
[git/dials_data] master: Merge pull request #19 from dials/update-blend_tutorial (af82923)
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Mon, 28 Jan 2019 15:52:13 +0000 |
66 lines |
[git/dials_data] master: Update file information for dataset blend_tutorial (4ce6682)
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Mon, 28 Jan 2019 15:37:27 +0000 |
197 lines |
[git/dials_data] master: Trigger update of dataset blend_tutorial (4a4b339)
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Mon, 28 Jan 2019 15:34:14 +0000 |
54 lines |
[git/dials_data] master: Merge pull request #18 from dials/blend_tutorial (f1ecc4d)
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Mon, 28 Jan 2019 15:32:39 +0000 |
66 lines |
[git/dials_data] master: Add blend tutorial definition (e9d9150)
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Mon, 28 Jan 2019 14:55:14 +0000 |
190 lines |
[git/dials] master: For #695 - use shorter labels so stack widget visible (91f4af4a5)
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Mon, 28 Jan 2019 08:30:00 +0000 |
109 lines |
[git/dials] master: Update msgpack, add blosc compression (13e829ac6)
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Fri, 25 Jan 2019 16:41:51 +0000 |
430 lines |
[git/dials] master: Changed the way the arrays are serialized so that an array is serialized as a binary blob rather than an msgpack ARRAY type. This takes less space and is much faster especially in the case of arrays of vec3/mat3 etc. The Shoebox column is a special case that is serialized as an array of Shoeboxes since a single Shoebox is itself a struct with arrays in. (6e4a5c1d1)
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Fri, 25 Jan 2019 16:41:51 +0000 |
1041 lines |
[git/dials] master: Added proper msgpack support doing the serialization in C++. Requires the msgpack-c C++ head files (a8917d4fb)
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Fri, 25 Jan 2019 16:41:51 +0000 |
1735 lines |
[git/dials] master: Changed the top level structure to be a map rather than array to make it easier to add more meta data in the future. (c4f44e3d7)
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Fri, 25 Jan 2019 16:41:51 +0000 |
413 lines |
[git/dials] master: Changed msgpack header format and removed old redundant test (9cb124053)
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Fri, 25 Jan 2019 16:41:51 +0000 |
424 lines |
[git/dials] master: Added pack and convert for tiny and c_grid to/from msgpack array rather than binary type (e55b5f5ed)
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Fri, 25 Jan 2019 16:41:51 +0000 |
451 lines |
[git/dials_data] master: Bump version: 0.4.0 → 0.5.0 (c00bc91)
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Thu, 24 Jan 2019 14:58:41 +0000 |
195 lines |
[git/dials_data] master: Merge pull request #17 from dials/update-vmxi_thaumatin (8b7f34c)
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Thu, 24 Jan 2019 14:33:44 +0000 |
67 lines |
[git/dials_data] master: Update file information for dataset vmxi_thaumatin (91e5234)
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Thu, 24 Jan 2019 14:20:35 +0000 |
95 lines |
[git/dials_data] master: Fix download URL (e41d243)
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Thu, 24 Jan 2019 14:13:05 +0000 |
97 lines |
[git/dials_data] master: Trigger update of dataset vmxi_thaumatin (2664a70)
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Thu, 24 Jan 2019 13:52:08 +0000 |
54 lines |
[git/dials_data] master: Example VMXi thaumatin data set from Eiger2X 4M (#16) (fe30409)
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Thu, 24 Jan 2019 13:50:59 +0000 |
100 lines |
[git/dials_data] master: Merge pull request #15 from dials/update-fumarase (c9e5b05)
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Thu, 24 Jan 2019 12:36:35 +0000 |
66 lines |
[git/dials_data] master: Update file information for dataset fumarase (19434a4)
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Thu, 24 Jan 2019 12:07:24 +0000 |
586 lines |
[git/dials_data] master: Trigger update of dataset fumarase (5383361)
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Thu, 24 Jan 2019 12:02:03 +0000 |
54 lines |
[git/dials] master: Add try except for symmetry to guard against resolutionizer RuntimeErrors (30dd2c5eb)
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Thu, 24 Jan 2019 12:01:30 +0000 |
171 lines |
[git/dials_data] master: Merge pull request #14 from dials/fumarase (d4f0beb)
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Thu, 24 Jan 2019 12:00:42 +0000 |
66 lines |
[git/dials] master: Improve speed of prf/sum intensity combination in scaling. (070dc1d83)
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Thu, 24 Jan 2019 10:21:37 +0000 |
424 lines |
[git/dials_data] master: Add fumarase dataset (c339253)
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Thu, 24 Jan 2019 08:31:30 +0000 |
522 lines |
[git/dials] master: Fix tutorial text after changes in 5bb45af82 (1e44e6f11)
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Wed, 23 Jan 2019 14:33:10 +0000 |
199 lines |
[git/dials] master: Fix for image viewer mask tool broken by 86f27a4f36843e566d326f4fa9e5f8708761d7f3 (15488a37a)
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Wed, 23 Jan 2019 10:15:32 +0000 |
124 lines |
[git/dials] master: add xfailing test for #693 (5d6dabcad)
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Tue, 22 Jan 2019 14:36:50 +0000 |
108 lines |
[git/dials] master: Update test for multi_dataset_handling (b46ba93ad)
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Tue, 22 Jan 2019 11:49:33 +0000 |
87 lines |
[git/dials] master: Fix bug in scaling Ih_table (74605c194)
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Tue, 22 Jan 2019 11:34:37 +0000 |
138 lines |
[git/dials] master: Tidy but does not seem to actually do anything much (7373ec7f7)
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Tue, 22 Jan 2019 11:29:58 +0000 |
85 lines |
[git/dials] master: Sanitize formatting for class (d9436aaf5)
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Tue, 22 Jan 2019 11:11:41 +0000 |
157 lines |
[git/dials] master: Sanitize formatting (8b03e633b)
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Tue, 22 Jan 2019 11:09:53 +0000 |
908 lines |
[git/dials] master: Stack images widget: user can now select number of images to stack; fixes dials/dials#660 (5600666f4)
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Tue, 22 Jan 2019 11:06:35 +0000 |
146 lines |
[git/dials] master: Functional interface (#689) (5f5385ce5)
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Mon, 21 Jan 2019 17:25:34 +0000 |
1712 lines |
[git/dials] master: Scaling: improve memory usage for spherical harmonics model. (93a009eb2)
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Mon, 21 Jan 2019 15:41:38 +0000 |
1232 lines |
[git/dials] master: Fix same bug in cosym too, occurs when no profile reflections were fitted. (baee1ceaf)
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Mon, 21 Jan 2019 15:24:31 +0000 |
114 lines |
[git/dials] master: Fix bug, which can occur when no profile reflections were fitted. (afde1b0ea)
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Mon, 21 Jan 2019 15:17:24 +0000 |
124 lines |
[git/dials_scratch] master: New parameter fix_unstable_detector_parameters=True (7cf7981)
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Mon, 21 Jan 2019 14:52:01 +0000 |
128 lines |
[git/dials_scratch] master: Only calculate RMSDs on the reflections used in refinement. (8c382e0)
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Mon, 21 Jan 2019 11:42:39 +0000 |
97 lines |
[git/dials] master: Remove integration shoeboxes at start of scaling. (e7865d74f)
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Fri, 18 Jan 2019 10:39:27 +0000 |
124 lines |
[git/dials_scratch] master: Fix following dials/dials@69046afcd (b77b6de)
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Fri, 18 Jan 2019 09:43:03 +0000 |
87 lines |
[git/dials] master: Fix docstrings to stop documentation build failure. (e54b36b38)
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Fri, 18 Jan 2019 09:10:40 +0000 |
224 lines |
[git/dials] master: Refactor scaling intensity combination for improved memory usage (d422f7533)
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Thu, 17 Jan 2019 17:11:02 +0000 |
1839 lines |
[git/dials] master: Add scaling model & outlier rejection module to documentation (ad2e956b0)
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Thu, 17 Jan 2019 10:13:19 +0000 |
1882 lines |
[git/dials] master: Don't store unneeded objects to help with scaling memory usage. (4b4804dae)
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Thu, 17 Jan 2019 10:13:19 +0000 |
452 lines |
[git/dials] master: Clean clutter (unused import) (d88b11ffd)
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Wed, 16 Jan 2019 13:57:58 -0800 |
83 lines |
[git/dials] master: Sync StringIO 2to3 from aaa6089c712bf6b022efb5a605d6446f0a9a27b9 plus a whitespace straggler (8279f7b00)
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Wed, 16 Jan 2019 13:31:26 -0800 |
121 lines |
[git/dials] master: Synch 2to3 pickle/xrange changes from 04edf365642b1fa84b0c63d2f2f9bea22ef96af8 (86f27a4f3)
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Wed, 16 Jan 2019 13:08:24 -0800 |
432 lines |
[git/dials] master: Sync whitespace changes from ccb671f68d23a24f8ad859bd11216e5a17f799d4 (89f4c41f2)
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Wed, 16 Jan 2019 11:05:41 -0800 |
1966 lines |
[git/dials] master: Remove redundant if statement (7683869e2)
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Wed, 16 Jan 2019 11:26:39 +0000 |
94 lines |
[git/dials] master: modify error message when run with --verbose (5bdc1bb4f)
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Wed, 16 Jan 2019 10:53:14 +0000 |
116 lines |
[git/dials] master: Make installer error messages useful (80db723ce)
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Wed, 16 Jan 2019 10:47:19 +0000 |
139 lines |
[git/dials] master: Add 'stats_only' option to dials.scale, closes #678 (31fcbf30e)
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Tue, 15 Jan 2019 16:06:16 +0000 |
295 lines |
[git/dials] master: Fix bug in dials.scale Ih_table (f7c54de5f)
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Tue, 15 Jan 2019 14:20:26 +0000 |
88 lines |
[git/dials] master: Changed print out of experiments to info rather than debug to make more visible. Fixes #681 (0903f9b52)
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Mon, 14 Jan 2019 16:37:22 +0000 |
128 lines |
[git/dials] master: Did a clean clutter (098a297a9)
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Mon, 14 Jan 2019 16:37:22 +0000 |
126 lines |
[git/dials] master: Fixed test for panel pedestal (f77bb95e3)
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Mon, 14 Jan 2019 16:37:22 +0000 |
105 lines |
[git/dials] master: If there is only a single image in the shoebox then set the z centroid as image + 0.5. Previously, as this was calculated as an intensity weighted centroid it would result in small deviations around 1e-7 from 0.5 which resulted in strange output in spot finding for a single image. Fixes #667 (174afd7c1)
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Mon, 14 Jan 2019 16:37:22 +0000 |
102 lines |
[git/dials] master: Fix python 2>3 syntax in make_sphinx_html (ca537e248)
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Mon, 14 Jan 2019 15:45:36 +0000 |
84 lines |
[git/dials] master: Correctly format docstring for reflection_table.as_miller_array() (b016057ce)
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Mon, 14 Jan 2019 15:31:51 +0000 |
163 lines |
[git/dials] master: ignore urllib error if not in strict mode (occasionally hit github api limit) (e331f5b09)
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Mon, 14 Jan 2019 15:25:27 +0000 |
98 lines |
[git/dials] master: Add reflections.as_miller_array(experiment, intensity='sum') option. (f566f4296)
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Mon, 14 Jan 2019 14:50:19 +0000 |
332 lines |
[git/dials] master: Add merging stats output to dials.export mmcif (if scaled), for #281 (007bea58d)
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Mon, 14 Jan 2019 13:45:00 +0000 |
145 lines |
[git/dials] master: Update scaling model plotting in dials-report (5eda3b187)
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Mon, 14 Jan 2019 10:21:28 +0000 |
143 lines |
[git/dials] master: Remove unused post scaling analysis code (74fd7bb06)
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Mon, 14 Jan 2019 10:21:28 +0000 |
748 lines |
[git/dials] master: Add new, simpler, Ih_table datastructures (9a05f4c0f)
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Mon, 14 Jan 2019 10:21:28 +0000 |
1100 lines |
[git/dials] master: Update symmetry call to outlier rejection (34b8afa68)
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Mon, 14 Jan 2019 10:21:28 +0000 |
95 lines |
[git/dials] master: Refactor outlier rejection code to use new Ih_table (e6c86f384)
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Mon, 14 Jan 2019 10:21:28 +0000 |
83 lines |
[git/dials] master: Changes to scaler and algorithm (fa09bc8d9)
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Mon, 14 Jan 2019 10:21:28 +0000 |
397 lines |
[git/dials] master: Refactor intensity combinaton code and add tests (cd5378329)
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Mon, 14 Jan 2019 10:21:28 +0000 |
1012 lines |
[git/dials] master: Update and refactor scaling algorithm code, fix tests. (009cf82ff)
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Mon, 14 Jan 2019 10:21:28 +0000 |
141 lines |
[git/dials] master: Modify scaling components behaviour. (c35d38d9e)
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Mon, 14 Jan 2019 10:21:28 +0000 |
1730 lines |
[git/dials] master: Remove options to calculate curvatures as not practical for minimisation. (7747984e8)
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Mon, 14 Jan 2019 10:21:28 +0000 |
2019 lines |
[git/dials] master: Code tidying, updates and tests (bc940c764)
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Mon, 14 Jan 2019 10:21:28 +0000 |
94 lines |
[git/dials] master: Remove old Ih_table, old scaler tests and code tidying/updates (f9b93d6a7)
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Mon, 14 Jan 2019 10:21:28 +0000 |
117 lines |
[git/dials] master: File renaming and tidying (998841e01)
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Mon, 14 Jan 2019 10:21:28 +0000 |
96 lines |
[git/dials] master: relax libtbx dependencies (21bdd0193)
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Mon, 14 Jan 2019 09:24:04 +0000 |
167 lines |
[git/dials] master: fix bug found by @jbeilstenedmands (c97101dc2)
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Fri, 11 Jan 2019 13:34:33 +0000 |
134 lines |
[git/dials] master: Updated cosym test with failing space_group= case (950ea5dd7)
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Fri, 11 Jan 2019 13:19:53 +0000 |
102 lines |
[git/dials] master: Remove now obsolete annoying banner code (f0fd2fc97)
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Fri, 11 Jan 2019 12:14:55 +0000 |
229 lines |
[git/dials] master: If present, show experiment identifier for dials.show experiments.json (c8d197abc)
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Fri, 11 Jan 2019 11:10:42 +0000 |
108 lines |
[git/dials] master: Remove option to append to log files (d47e41a12)
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Thu, 10 Jan 2019 16:44:11 +0000 |
203 lines |
[git/dials] master: Fix undefined mscvrt unlock mode constant (53382089d)
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Thu, 10 Jan 2019 10:00:09 +0000 |
79 lines |
[git/dials] master: Rationalise default logging behaviour (64f3f9777)
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Wed, 9 Jan 2019 18:32:36 +0000 |
409 lines |
[git/dials] master: to_xds.XDS_INP() now returns string (9c73df11f)
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Tue, 8 Jan 2019 16:49:09 +0000 |
105 lines |
[git/dials] master: convert_to_cbf: use FormatCFBMini.as_file() (86210cae6)
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Mon, 7 Jan 2019 17:21:09 +0000 |
208 lines |
[git/dials] master: add dials.symmetry to programs documentation page (86980354f)
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Mon, 7 Jan 2019 12:14:31 +0000 |
157 lines |
[git/dials] master: mod not module (fixes #682) (0ecdfd7f6)
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Mon, 7 Jan 2019 11:59:14 +0000 |
86 lines |
[git/dials] master: not private functions since used in xia2; add docstrings (76bde0a49)
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Fri, 4 Jan 2019 17:37:24 +0000 |
265 lines |
[git/dials] master: missed off commit (d7ce7d15a)
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Fri, 4 Jan 2019 16:28:14 +0000 |
87 lines |
[git/dials] master: newlines; not Sorry; etc (e8a197cc7)
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Fri, 4 Jan 2019 15:49:52 +0000 |
134 lines |
[git/dials] master: additional symmetry documentation (546899179)
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Fri, 4 Jan 2019 15:26:18 +0000 |
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[git/dials] master: add placeholder for scaling library documentation (24c88834a)
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Fri, 4 Jan 2019 15:05:19 +0000 |
119 lines |
[git/dials] master: remove untest test script (89607d729)
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Fri, 4 Jan 2019 15:01:08 +0000 |
278 lines |
[git/dials] master: satisfy pydocstyle (b2e34a610)
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Fri, 4 Jan 2019 15:01:08 +0000 |
2011 lines |
[git/dials] master: generate_test_data -> private module for testing only (9688f853f)
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Fri, 4 Jan 2019 15:01:08 +0000 |
746 lines |
[git/dials] master: module docstrings (2b93da34e)
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Fri, 4 Jan 2019 15:01:08 +0000 |
267 lines |
[git/dials] master: remove unused class (c440496e6)
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Fri, 4 Jan 2019 14:28:36 +0000 |
115 lines |
[git/dials] master: minor documentation changes (a1f7d2a12)
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Fri, 4 Jan 2019 11:34:04 +0000 |
278 lines |
[git/dials] master: minor documentation fixes (cf05a5f92)
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Fri, 4 Jan 2019 11:00:56 +0000 |
174 lines |
[git/dials] master: more documentation for algorithms/symmetry (a677676d9)
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Fri, 4 Jan 2019 10:43:10 +0000 |
1123 lines |
[git/dials] master: refactor command_line/symmetry.py script (093389733)
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Thu, 3 Jan 2019 15:09:09 +0000 |
789 lines |
[git/dials] master: move unit cell consistency check and normalisation to separate methods (732716f6a)
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Thu, 3 Jan 2019 12:26:40 +0000 |
309 lines |
[git/dials] master: bug fix: don't attempt automatic determination of dimensions if max dim == 2 (610ef2f5d)
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Thu, 3 Jan 2019 10:49:01 +0000 |
93 lines |
[git/dials] master: Clean up printing of merging stats in scaling. fixes #677 (170318213)
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Wed, 2 Jan 2019 12:11:02 +0000 |
260 lines |
[git/dials] master: Assert to help chase down #676 (7fcb3851e)
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Wed, 2 Jan 2019 08:53:45 +0000 |
85 lines |
