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[git/dials] master: dials.image_viewer: select correct button if display= is set on command line (#354) (0f989c11)
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Wed, 31 May 2017 17:35:07 +0100 |
388 lines |
[git/dials] master: Bugfix (bc6d6147)
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Wed, 31 May 2017 08:59:56 -0700 |
84 lines |
[git/dials] master: Fixed idials test (0bcaf934)
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Wed, 31 May 2017 16:03:08 +0100 |
82 lines |
[git/dials] master: If no reflections in export raise Sorry; fixes #357 (9e1ac335)
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Wed, 31 May 2017 10:58:00 +0100 |
82 lines |
[git/dials_scratch] master: script to generate unit cell histograms (cd7420d)
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Tue, 30 May 2017 12:36:53 +0100 |
473 lines |
[git/dials_scratch] master: script for danny to calculate detector distance given a list of experiments.json (d104d35)
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DIALS Scratch Commit via DLS Jenkins |
Tue, 30 May 2017 12:31:25 +0100 |
213 lines |
[git/dials_scratch] master: script to plot orientation matrices decomposed into Euler angle space (6a5b9b4)
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Tue, 30 May 2017 12:31:25 +0100 |
197 lines |
[git/dials_scratch] master: Add scale_factor, a multiplier for the deltapsi weights computed in summed_intensity mode (7bbcdcb)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Put everything in a run method (e6bce1a)
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Tue, 30 May 2017 12:31:25 +0100 |
215 lines |
[git/dials_scratch] master: Calculations to rotate blind region to reflecting position (473e5c3)
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DIALS Scratch Commit via DLS Jenkins |
Tue, 30 May 2017 12:31:25 +0100 |
246 lines |
[git/dials_scratch] master: script to ensure consistent indexing between consecutive experiments (8f9f515)
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DIALS Scratch Commit via DLS Jenkins |
Tue, 30 May 2017 12:31:25 +0100 |
219 lines |
[git/dials_scratch] master: Script to weight delta psi by various methods for use in refinement. (4d7bf3f)
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DIALS Scratch Commit via DLS Jenkins |
Tue, 30 May 2017 12:31:25 +0100 |
397 lines |
[git/dials_scratch] master: Tool to extend an experiment to 360 degrees, to allow prediction of all possible measurable reflections (ca29e52)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: include cc_anom plot (c7a1a3f)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Export second experiment (33863d5)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Added some test scripts for bayesian inference (4162911)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Don't build test stuff because it uses c++11 which I guess not everyone uses yet. (abf391c)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Testing some profile modelling stuff (3d1fb8a)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Add output_selection and use_selection. Useful for retaining a particular partitioning and re-using it, in the case of doing many tests but wanting the same set of split reflection tables. (e7d6a4d)
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Tue, 30 May 2017 12:31:25 +0100 |
180 lines |
[git/dials_scratch] master: Jiffy script to split a reflection table into two random halves. (4ea5f12)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Ignore notifier log file (b5aff8b)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Added some useful output and plotting and comments (14575a1)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Added a little script to test possible ways of computing sigma_m (74f468b)
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Tue, 30 May 2017 12:31:25 +0100 |
333 lines |
[git/dials_scratch] master: unwrap the euler angles for continuous plot (2a4da63)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Added some forward function (02b8386)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Tidied up high lever class (ddb0580)
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Tue, 30 May 2017 12:31:25 +0100 |
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[git/dials_scratch] master: Added some active mq testsing stuff (7f55a86)
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Tue, 30 May 2017 12:29:40 +0100 |
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[git/dials_scratch] master: skip plot if 'intensity.sum.value' missing from reflection list (dd756b6)
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Tue, 30 May 2017 12:29:40 +0100 |
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[git/dials_scratch] master: Removed ols stuff (8336e9c)
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Tue, 30 May 2017 11:37:15 +0100 |
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[git/dials_scratch] master: postcautionary excludes (66be24b)
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Tue, 30 May 2017 11:08:47 +0100 |
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[git/dials_scratch] master: Ignore notifier log file (0d3a702)
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Tue, 30 May 2017 11:04:29 +0100 |
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[git/dials] master: dials.show: match up resolution output for datablock and experiment (7c15fff0)
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Fri, 26 May 2017 15:36:34 +0100 |
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[git/dials] master: dials.discover_better_experimental_model: fail if not enough DPS solutions found (#353) (38dfc7eb)
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Fri, 26 May 2017 14:48:28 +0100 |
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[git/dials] master: tst_find_spots_server_client.py: sort filenames (fc6d18d0)
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Fri, 26 May 2017 13:48:20 +0100 |
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[git/dials] master: jinja template macros: support for embedded image data (1006b6ac)
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Fri, 26 May 2017 13:26:31 +0100 |
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[git/dials] master: dials.export_bitmaps bug fix for still shots with a scan (08212fc3)
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Fri, 26 May 2017 13:20:07 +0100 |
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[git/dials] master: dials.show: catch beam not intersecting with any panel (b131070a)
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Fri, 26 May 2017 13:01:53 +0100 |
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[git/dials] master: Fixed tests for changesa in profile model (a5c6344a)
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Fri, 26 May 2017 11:03:11 +0100 |
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[git/dials] master: Added parameter to set reference profile debug output. debug.reference.filename="something.pickle" (3d57a592)
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Fri, 26 May 2017 10:00:22 +0100 |
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[git/dials] master: Change print to logger.debug in sigma_m output. Changes sigma_m algorithm to new method (158a93c5)
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Fri, 26 May 2017 10:00:22 +0100 |
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[git/dials] master: fix expected CMOSAIC output (68853ef9)
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Thu, 25 May 2017 15:01:42 +0100 |
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[git/dials] master: dials.export format=best: convert sigma_m to FWHM for mosaicity output (8ee0d896)
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Thu, 25 May 2017 14:46:48 +0100 |
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[git/dials] master: Process dies, daemonic children die. (c10c5526)
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Thu, 25 May 2017 10:40:46 +0100 |
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[git/dials] master: No not report connection refused errors. They are to be expected due to the way we communicate. (c224e5a4)
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Thu, 25 May 2017 10:17:14 +0100 |
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[git/dials] master: bug fix (8abf4895)
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Thu, 25 May 2017 10:16:51 +0100 |
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[git/dials] master: Fix broken documentation generation (e3c08d23)
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Thu, 25 May 2017 08:37:53 +0100 |
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[git/dials] master: Merge pull request #350 from dials/overlaps_filter (d60e2d86)
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Wed, 24 May 2017 13:37:43 -0700 |
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[git/dials] master: Lowered the number of spots used (77c7660d)
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Wed, 24 May 2017 17:02:28 +0100 |
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[git/dials] master: Added extra help message (1b426cdc)
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Wed, 24 May 2017 17:02:28 +0100 |
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[git/dials] master: Include sorry import (e7f1be7e)
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Tue, 23 May 2017 13:15:59 +0100 |
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[git/dials] master: simple_strategy: report results for +/- 2theta (9939f6f8)
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Tue, 23 May 2017 11:33:23 +0100 |
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[git/dials] master: Add shadowing switch; use logging (1966a4d2)
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Tue, 23 May 2017 11:30:10 +0100 |
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[git/dials] master: simple_strategy: fix order of axes to rotation_decomposition; print both solutions (8f16203c)
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Tue, 23 May 2017 11:17:22 +0100 |
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[git/dials] master: dials.import_xds: when deriving reindex matrix ensure secondary target is orthogonal to primary target (4b6101cd)
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Tue, 23 May 2017 10:32:36 +0100 |
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[git/dials] master: Move from sill name to sensible; added some checks; moved from dev.dials to dials proper (20a7c176)
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Tue, 23 May 2017 09:10:08 +0100 |
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[git/dials] master: Update inscribed resolution (e3f65e42)
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Tue, 23 May 2017 08:34:55 +0100 |
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[git/dials] master: Rest of commit (2357d1e8)
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Tue, 23 May 2017 07:55:54 +0100 |
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[git/dials] master: Refactor shadow filtering to one place (24335b1d)
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Tue, 23 May 2017 07:25:48 +0100 |
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[git/dials] master: (optionally) respect shadowing in dials.predict; fixes #349; side effect (for discussion) needs image data; #TODO find way to check_format=auto so only needs this if necessary... (863044f3)
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Tue, 23 May 2017 07:07:44 +0100 |
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[git/dials] master: Enable post-integration filtering of overlapping reflections. (7e3153f0)
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Mon, 22 May 2017 13:59:08 -0700 |
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[git/dials_scratch] master: Put everything in a run method (b937134)
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Mon, 22 May 2017 13:26:50 -0700 |
214 lines |
[git/dials_scratch] master: Add output_selection and use_selection. Useful for retaining a particular partitioning and re-using it, in the case of doing many tests but wanting the same set of split reflection tables. (4e61349)
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Mon, 22 May 2017 13:23:58 -0700 |
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[git/dials_scratch] master: Jiffy script to split a reflection table into two random halves. (6d54dcc)
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Mon, 22 May 2017 08:54:48 -0700 |
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[git/dials] master: Cleanup; save rotated experiments for later prediction (should save predictions; cut out middle man) ; remove hard coded axis names (b3ba919f)
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Mon, 22 May 2017 16:20:05 +0100 |
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[git/dials] master: Think the shadow calculations now being done correctly, looks hopeful, will test tomorrow properly (7e325db4)
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Mon, 22 May 2017 14:45:54 +0100 |
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[git/dials] master: Now figured out why not getting shadow effects, sadly now getting massive effects... (9db0e91c)
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Mon, 22 May 2017 12:58:45 +0100 |
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[git/dials] master: In principle I think I have shadowing implemented but it does not seem to be working... (e17e1997)
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Mon, 22 May 2017 12:43:25 +0100 |
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[git/dials] master: Work, in progress (d1221522)
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Mon, 22 May 2017 12:25:12 +0100 |
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[git/dials] master: Now calculate reflections from reorientation; seems sensible; not taking into consideration yet the shadowing: (80513bd8)
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Mon, 22 May 2017 11:53:23 +0100 |
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[git/dials] master: Predict full miller set, fraction of reflections observed in 360 degree run at datum (1abcfd75)
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Mon, 22 May 2017 11:39:43 +0100 |
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[git/dials] master: Now work from expts.json (53ac2409)
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Mon, 22 May 2017 11:09:13 +0100 |
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[git/dials] master: Be more graceful with failure; output good: (6016ebe7)
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Mon, 22 May 2017 10:23:52 +0100 |
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[git/dials] master: Jiffy application to work out how to rotate the blind region out of the blind region on I04-with-minikappa, to allow measurement of same with subsequent sweep; comments included on how this can be improved (6dc013c2)
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Mon, 22 May 2017 10:12:49 +0100 |
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[git/dials_scratch] master: Export second experiment (4aca497)
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Mon, 22 May 2017 09:48:15 +0100 |
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[git/dials_scratch] master: Calculations to rotate blind region to reflecting position (821a151)
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Mon, 22 May 2017 09:40:03 +0100 |
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[git/dials_scratch] master: Tool to extend an experiment to 360 degrees, to allow prediction of all possible measurable reflections (f63a77f)
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Mon, 22 May 2017 07:14:31 +0100 |
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[git/dials_scratch] master: Add scale_factor, a multiplier for the deltapsi weights computed in summed_intensity mode (cf2d081)
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Fri, 19 May 2017 15:16:12 -0700 |
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[git/dials] master: Updated likelihood function (7612fccd)
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Fri, 19 May 2017 16:47:42 +0100 |
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[git/dials_scratch] master: script for danny to calculate detector distance given a list of experiments.json (dc362e0)
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Fri, 19 May 2017 16:46:01 +0100 |
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[git/dials_scratch] master: Added a little script to test possible ways of computing sigma_m (8a9453c)
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Fri, 19 May 2017 14:12:25 +0100 |
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[git/dials] master: When data are so nasty that interval width cannot be determined automatically, set it to the full scan range for safety. Allows Jeppe's case to refine when orientation.smoother.interval_width_degrees=auto unit_cell.smoother.interval_width_degrees=auto (f3d0acf5)
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Fri, 19 May 2017 07:53:29 +0100 |
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[git/dials_scratch] master: Script to weight delta psi by various methods for use in refinement. (be21ea0)
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Thu, 18 May 2017 17:30:30 -0700 |
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[git/dials] master: Additional support for delpsical.weights being computed externally (5dcb0668)
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Thu, 18 May 2017 17:27:21 -0700 |
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[git/dials] master: Add a strict test of new features in dials.refine (dd0778c3)
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Thu, 18 May 2017 13:39:16 +0100 |
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[git/dials] master: Don't allow scan-varying interval width to be set smaller than the proposed block width for outlier rejection (c611e137)
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Thu, 18 May 2017 11:09:19 +0100 |
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[git/dials] master: Move centroid analysis plot generation to its own command, dev.dials.plot_centroid_analysis. Run this on indexed reflections.pickle to see the periodogram of residuals and the suggested scan-varying interval width (e82e3191)
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Thu, 18 May 2017 11:09:19 +0100 |
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[git/dials] master: Revert "Fix build by reverting last 3 commits." (24443aba)
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Thu, 18 May 2017 09:52:50 +0100 |
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[git/dials] master: Swap the meaning of the -s (--sort) flag for the OptionParser (31457b82)
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Wed, 17 May 2017 12:43:22 -0700 |
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[git/dials] master: more robust suggested interval width based on centroid analysis (f2fa8186)
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Wed, 17 May 2017 20:37:15 +0100 |
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[git/dials] master: avoid mutable default arguments (see www.quantifiedcode.com) (4f6c8abf)
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Wed, 17 May 2017 14:06:27 +0100 |
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[git/dials] master: Changes to allow interval_width_degrees=auto, which calculates from periodograms of the residuals, for #162. Not yet default - requires testing with difficult cases (3d203ef2)
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Wed, 17 May 2017 12:35:37 +0100 |
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[git/dials] master: Fix build by reverting last 3 commits. (f23daac2)
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Wed, 17 May 2017 10:44:27 +0100 |
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[git/dials] master: Removed print debug stuff (ec0c8f47)
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Tue, 16 May 2017 16:54:00 +0100 |
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[git/dials] master: Fixed bug and fixed some tests (d03090e2)
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Tue, 16 May 2017 16:37:25 +0100 |
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[git/dials] master: Add padding to predictions (prediction.padding=degrees) by default 1 degree (de54fca5)
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Tue, 16 May 2017 15:56:11 +0100 |
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[git/dials] master: Fixed bug (a6c8a295)
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Mon, 15 May 2017 10:10:17 +0100 |
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[git/dials] master: Fixed loop variables (26f81e9e)
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Mon, 15 May 2017 09:29:20 +0100 |
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[git/dials] master: Added C++ function to got from pixel to miller index (7c4f2646)
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Mon, 15 May 2017 09:29:20 +0100 |
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[git/dials] master: Adding filtering of pixels based on fractional miller index (ed57d6ef)
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Mon, 15 May 2017 09:29:20 +0100 |
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[git/dials] master: Filter pixels in reference reflections in integration to make profile modelling more stable. (413904a8)
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Mon, 15 May 2017 09:29:20 +0100 |
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[git/dials_scratch] master: unwrap the euler angles for continuous plot (78403cf)
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Fri, 12 May 2017 11:33:32 +0100 |
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[git/dials] master: report template: use https instead of http for bootstrap links (b6b0c6a4)
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Fri, 12 May 2017 10:51:48 +0100 |
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[git/dials_scratch] master: script to plot orientation matrices decomposed into Euler angle space (922e707)
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Wed, 10 May 2017 16:54:49 +0100 |
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[git/dials_scratch] master: script to ensure consistent indexing between consecutive experiments (f1ce3b5)
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Wed, 10 May 2017 11:51:48 +0100 |
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[git/dials] master: minor corrections (f7fe1d94)
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Wed, 10 May 2017 10:26:49 +0100 |
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[git/dials] master: Conclusions from Andrey (9948de79)
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Wed, 10 May 2017 09:56:44 +0100 |
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[git/dials] master: dials.stereographic_projection: add colour_map option for colouring points according to epoch (if available) or experiment id (26c5216a)
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Tue, 9 May 2017 16:50:41 +0100 |
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[git/dials] master: corrections and improvements from Andrey and Harry (8d5d2883)
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Tue, 9 May 2017 12:20:13 +0100 |
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[git/dials] master: Split DPF3 tutorial into two parts: one for correcting the beam centre, the second for investigating pseudocentring (ebb3726f)
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Sat, 6 May 2017 00:18:44 +0100 |
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[git/dials] master: use data-target instead of href in jinja template (3e805235)
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Fri, 5 May 2017 18:28:42 +0100 |
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[git/dials] master: remove doctype from macros.html (54f9ea7e)
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Fri, 5 May 2017 18:06:41 +0100 |
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[git/dials] master: P212121 vs C2221 (490e4518)
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Fri, 5 May 2017 16:23:11 +0100 |
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[git/dials] master: Updated version of this to match with tutorial text (80055e67)
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Fri, 5 May 2017 13:24:51 +0100 |
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[git/dials] master: Figure comparing crystal orientations (127901d9)
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Fri, 5 May 2017 13:24:51 +0100 |
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[git/dials] master: improve text (511b6aca)
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Fri, 5 May 2017 13:24:51 +0100 |
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[git/dials] master: Bugfix: don't accept single-xtal clusters by default (crashes dials.refine) (e1a3d7ec)
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Thu, 4 May 2017 17:12:07 -0700 |
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[git/dials] master: Better URL to link to (8772cc90)
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Thu, 4 May 2017 18:39:00 +0100 |
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[git/dials] master: new figure (aa01997d)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: correct figure (5c7afcc0)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: Another figure for updated tutorial text (29988878)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: New figure for tutorial (9e5b19be)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: Updated tutorial text (629abac6)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: Another new figure for the updated tutorial (c43d751b)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: New figure (d7faddf5)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: New figures (398408f2)
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Thu, 4 May 2017 18:38:59 +0100 |
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[git/dials] master: updated version of figure (89c9d400)
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Thu, 4 May 2017 18:38:58 +0100 |
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[git/dials] master: updated versions of figures (6f1f58ba)
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Thu, 4 May 2017 18:38:58 +0100 |
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[git/dials] master: jinja macros template: switch meaning of has_column_header and has_row_header (875aed26)
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DIALS Commit via DLS Jenkins |
Thu, 4 May 2017 16:48:01 +0100 |
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[git/dials] master: Move character encoding declaration into first 1024 bytes of file to avoid browsers having to reload the page (e49f30e6)
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DIALS Commit via DLS Jenkins |
Thu, 4 May 2017 10:37:42 +0100 |
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[git/dials] master: size reduction and syntactical fixes (934a6432)
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DIALS Commit via DLS Jenkins |
Thu, 4 May 2017 10:23:58 +0100 |
480 lines |
[git/dials] master: Fix export format=sadabs; matrix shape issue (82b0fde1)
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DIALS Commit via DLS Jenkins |
Thu, 4 May 2017 06:38:01 +0100 |
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[git/dials] master: display/hide basis vectors on click (75d95b4e)
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DIALS Commit via DLS Jenkins |
Wed, 3 May 2017 10:35:15 +0100 |
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[git/dials_scratch] master: include cc_anom plot (38d0031)
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DIALS Scratch Commit via DLS Jenkins |
Wed, 3 May 2017 10:26:41 +0100 |
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[git/dials_scratch] master: Don't build test stuff because it uses c++11 which I guess not everyone uses yet. (c65c0ab)
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DIALS Scratch Commit via DLS Jenkins |
Tue, 2 May 2017 09:13:10 +0100 |
82 lines |
