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July 2012

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Subject	From	Date	Size
Re: Impute V2.2.2 generate missing probability for SNPs	Bryan Howie	Tue, 31 Jul 2012 16:33:23 -0500	91 lines
Re: that flippin' strand issue again (IMPUTE2)	Bryan Howie	Tue, 31 Jul 2012 16:31:52 -0500	183 lines
that flippin' strand issue again (IMPUTE2)	Sarah Nelson	Tue, 31 Jul 2012 13:12:22 -0700	154 lines
Impute V2.2.2 generate missing probability for SNPs	Taye H Hamza	Tue, 31 Jul 2012 19:53:54 +0100	30 lines
Re: SHAPEIT: handle mixture of unrelated, trios and duos	olivier delaneau	Tue, 31 Jul 2012 18:23:04 +0100	133 lines
SHAPEIT: handle mixture of unrelated, trios and duos	Chen Peng	Tue, 31 Jul 2012 13:05:58 +0800	173 lines
Re: genetic map files	Bryan Howie	Fri, 27 Jul 2012 15:40:43 -0500	202 lines
pre-phasing imputation paper published	Jonathan Marchini	Thu, 26 Jul 2012 23:09:14 +0100	26 lines
Re: pre-phasing in IMPUTE2 where some haplotypes are missing	Sarah Nelson	Wed, 25 Jul 2012 13:15:11 -0700	437 lines
Re: pre-phasing in IMPUTE2 where some haplotypes are missing	Bryan Howie	Wed, 25 Jul 2012 14:46:00 -0500	231 lines
Re: pre-phasing in IMPUTE2 where some haplotypes are missing	Bryan Howie	Wed, 25 Jul 2012 14:05:41 -0500	166 lines
pre-phasing in IMPUTE2 where some haplotypes are missing	Sarah Nelson	Wed, 25 Jul 2012 10:40:54 -0700	150 lines
SNPtest source code?	Liam Gretton	Tue, 24 Jul 2012 15:15:52 +0100	40 lines
Re: SNPTEST problem conditioning on continuous variables	Mark Iles	Mon, 23 Jul 2012 14:45:19 +0100	268 lines
running SNPTEST results in "Segmentation fault"	Chen, Jim	Fri, 20 Jul 2012 15:05:49 -0400	273 lines
Re: -overlap and new imputation panel with 1 SNPs on the same position	Dina Christian	Fri, 20 Jul 2012 15:25:00 +0200	111 lines
Re: -overlap and new imputation panel with 1 SNPs on the same position	Gavin Band	Fri, 20 Jul 2012 13:12:41 +0000	70 lines
Problems with IMPUTE ver 2.2.2 (windows)	Yoon Ming	Fri, 20 Jul 2012 14:08:24 +0100	214 lines
Re: SNPTEST problem conditioning on continuous variables	Gavin Band	Fri, 20 Jul 2012 12:52:17 +0000	248 lines
-overlap and new imputation panel with 1 SNPs on the same position	Dina Christian	Fri, 20 Jul 2012 14:12:30 +0200	47 lines
Re: missing genotype data code in SHAPEIT??	Sarah Nelson	Thu, 19 Jul 2012 15:10:50 -0700	891 lines
Re: missing genotype data code in SHAPEIT??	Jonathan Marchini	Thu, 19 Jul 2012 22:08:03 +0100	952 lines
Re: missing genotype data code in SHAPEIT??	Sarah Nelson	Thu, 19 Jul 2012 14:03:55 -0700	787 lines
Re: missing genotype data code in SHAPEIT??	olivier delaneau	Thu, 19 Jul 2012 20:43:50 +0100	489 lines
Re: missing genotype data code in SHAPEIT??	Sarah Nelson	Thu, 19 Jul 2012 10:39:24 -0700	561 lines
IMPUTE with -use_prephased_g flag	Petr Danecek	Thu, 19 Jul 2012 11:42:48 +0200	37 lines
Re: missing genotype data code in SHAPEIT??	olivier delaneau	Thu, 19 Jul 2012 10:08:02 +0100	338 lines
Re: SNPTEST problem conditioning on continuous variables	Mark Iles	Thu, 19 Jul 2012 08:56:24 +0100	5290 lines
Re: missing genotype data code in SHAPEIT??	Sarah Nelson	Wed, 18 Jul 2012 10:39:22 -0700	384 lines
Re: missing genotype data code in SHAPEIT??	olivier delaneau	Wed, 18 Jul 2012 18:25:38 +0100	158 lines
missing genotype data code in SHAPEIT??	Sarah Nelson	Wed, 18 Jul 2012 10:04:53 -0700	143 lines
Re: SHAPEIT gets stuck but there is no error message	Sarah Nelson	Wed, 18 Jul 2012 09:58:15 -0700	50 lines
Re: SNPTEST problem conditioning on continuous variables	Gavin Band	Wed, 18 Jul 2012 09:34:16 +0000	81 lines
Re: SNPTEST problem conditioning on continuous variables	Gavin Band	Wed, 18 Jul 2012 09:31:10 +0000	41 lines
Re: SNPTEST problem conditioning on continuous variables	Dina Christian	Wed, 18 Jul 2012 11:24:53 +0200	64 lines
Re: SNPTEST problem conditioning on continuous variables	William Brandler	Wed, 18 Jul 2012 10:10:46 +0100	32 lines
Re: IMPUTE2: * glibc detected *	Jie Huang	Sat, 14 Jul 2012 15:51:22 +0100	187 lines
Re: representing missing data in a genotype probabilities file	Bryan	Fri, 13 Jul 2012 11:08:31 -0500	158 lines
SNPTEST problem conditioning on continuous variables	Mark Iles	Fri, 13 Jul 2012 16:41:16 +0100	65 lines
Re: Chromosome X SNPTEST	Gavin Band	Fri, 13 Jul 2012 13:34:04 +0000	68 lines
IMPUTE2: * glibc detected *	Jie Huang	Fri, 13 Jul 2012 14:11:06 +0100	263 lines
Chromosome X SNPTEST	Dina Christian	Fri, 13 Jul 2012 14:08:32 +0200	48 lines
representing missing data in a genotype probabilities file	Sarah Nelson	Thu, 12 Jul 2012 13:31:43 -0700	158 lines
Re: SNPs outside the genetic map	Bryan Howie	Thu, 5 Jul 2012 14:39:42 -0500	79 lines
Re: SNPs outside the genetic map	Zheng Zhang	Thu, 5 Jul 2012 19:38:35 +0000	154 lines
SNPs outside the genetic map	Gaddis, Nathan	Thu, 5 Jul 2012 15:11:40 -0400	139 lines
Re: Imputation error for chromosome X	Stephane Bourgeois	Thu, 5 Jul 2012 16:56:09 +0100	327 lines
Re: IMPUTE2: error using pre-phased chunks for imputation	Bryan	Thu, 5 Jul 2012 10:43:48 -0500	178 lines
Re: IMPUTE2: error using pre-phased chunks for imputation	Navarini, Alexander	Thu, 5 Jul 2012 16:28:59 +0100	144 lines
SNPtest: about count data and 'quantile_normalise_phenotypes' option	Josep Maria Mercader	Thu, 5 Jul 2012 11:55:56 +0200	121 lines
new version of SNPTEST (v2.4.1)	Jonathan Marchini	Tue, 3 Jul 2012 10:19:31 +0100	37 lines
Re: IMPUTE2: exclude phased haplotypes from phased reference file?	Bryan Howie	Mon, 2 Jul 2012 21:16:18 -0500	95 lines
IMPUTE2: exclude phased haplotypes from phased reference file?	Sarah Nelson	Mon, 2 Jul 2012 18:10:37 -0700	109 lines
Re: Any special option for X chromosome phasing in ShapeIT?	Sarah Nelson	Mon, 2 Jul 2012 13:05:40 -0700	370 lines
Re: Imputation error for chromosome X	Sarah Nelson	Mon, 2 Jul 2012 07:53:36 -0700	235 lines
Imputation error for chromosome X	Stephane Bourgeois	Mon, 2 Jul 2012 11:21:36 +0100	171 lines