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May 2012

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Subject	From	Date	Size
Re: After imputation cuestions	Jonathan Marchini	Thu, 31 May 2012 22:31:04 +0100	59 lines
Re: IMPUTE2 Merge-pre-phased	Jonathan Marchini	Thu, 31 May 2012 22:06:12 +0100	37 lines
IMPUTE2 Merge-pre-phased	Robin Young	Thu, 31 May 2012 14:48:02 +0100	31 lines
META source code	Javier Gutierrez A	Thu, 31 May 2012 15:03:32 +0200	40 lines
After imputation cuestions	Javier Gutierrez A	Thu, 31 May 2012 13:23:17 +0200	73 lines
Re: IMPUTE2 jobs sending my cluster node into alarm state	Sarah Nelson	Wed, 30 May 2012 11:16:54 -0700	213 lines
inconsistent positions for strand files posted at http://www.well.ox.ac.uk/~wrayner/strand/	Jie Huang	Sun, 27 May 2012 08:00:30 +0100	192 lines
IMPUTE2 jobs sending my cluster node into alarm state	Sarah Nelson	Fri, 25 May 2012 15:13:30 -0700	145 lines
Re: QCTOOL -incl-range does not generate output	Gavin Band	Thu, 24 May 2012 15:19:50 +0000	463 lines
Re: QCTOOL -incl-range does not generate output	Gavin Band	Thu, 24 May 2012 15:14:44 +0000	416 lines
Re: QCTOOL -incl-range does not generate output	Jie Huang	Thu, 24 May 2012 16:07:16 +0100	447 lines
for your information: beware of duplicates	Stephane Bourgeois	Thu, 24 May 2012 14:48:59 +0100	44 lines
Is it possible to change the built-in limit to less than 100 individuals?	Tony	Thu, 24 May 2012 14:36:42 +0100	24 lines
Re: QCTOOL -incl-range does not generate output	Gavin Band	Thu, 24 May 2012 12:01:24 +0000	287 lines
Re: QCTOOL -incl-range does not generate output	Jie Huang	Thu, 24 May 2012 12:46:10 +0100	5415 lines
Re: QCTOOL -incl-range does not generate output	Gavin Band	Thu, 24 May 2012 08:55:08 +0000	149 lines
QCTOOL -incl-range does not generate output	Jie Huang	Thu, 24 May 2012 09:25:39 +0100	248 lines
Re: Converting from ShapeIt output to Impute phased panel format?	Gavin Band	Tue, 22 May 2012 13:24:45 +0000	132 lines
Converting from ShapeIt output to Impute phased panel format?	Stephane Bourgeois	Tue, 22 May 2012 14:15:07 +0100	151 lines
Re: Missing data while converting to ped/map with Gtool	Stephane Bourgeois	Mon, 21 May 2012 10:25:12 +0100	270 lines
Re: Missing data while converting to ped/map with Gtool	Aparna Radhakrishnan	Mon, 21 May 2012 10:10:00 +0100	234 lines
Re: Missing data while converting to ped/map with Gtool	Stephane Bourgeois	Mon, 21 May 2012 09:57:23 +0100	452 lines
Re: HAPGEN2 input recombination rate file	Bryan Howie	Fri, 18 May 2012 12:30:37 -0400	72 lines
Re: phasing and imputation of the whole chromosome X	Stephane Bourgeois	Fri, 18 May 2012 12:50:00 +0100	387 lines
Re: phasing and imputation of the whole chromosome X	olivier delaneau	Fri, 18 May 2012 11:58:42 +0100	179 lines
Missing data while converting to ped/map with Gtool	Stephane Bourgeois	Fri, 18 May 2012 11:55:47 +0100	377 lines
phasing and imputation of the whole chromosome X	Stephane Bourgeois	Fri, 18 May 2012 11:34:12 +0100	166 lines
HAPGEN2 input recombination rate file	Yaji Xu	Fri, 18 May 2012 03:09:07 +0100	23 lines
one phased and one uinphased reference panel	Claire Palles	Wed, 16 May 2012 18:15:01 +0100	153 lines
Re: IMPUTE2 --phase option	Bryan Howie	Wed, 16 May 2012 13:10:10 -0400	300 lines
Re: QCTOOL: # for a maximum of 22 ?	Jie Huang	Wed, 16 May 2012 15:59:37 +0100	267 lines
Re: QCTOOL: # for a maximum of 22 ?	Gavin Band	Wed, 16 May 2012 13:59:46 +0000	137 lines
QCTOOL: # for a maximum of 22 ?	Jie Huang	Wed, 16 May 2012 14:31:00 +0100	159 lines
HWE field in QCTOOL output	John Curtin	Wed, 16 May 2012 13:19:13 +0000	114 lines
Re: IMPUTE2 --phase option	Audrey GRANT	Wed, 16 May 2012 12:12:15 +0200	229 lines
Re: QCTOOL -incl-range: Exited with exit code 134	Gavin Band	Wed, 16 May 2012 09:19:40 +0000	157 lines
HAPGEN2 input recombination rate file	Yaji Xu	Tue, 15 May 2012 15:26:45 -0400	23 lines
Re: IMPUTE2 --phase option	Bryan Howie	Tue, 15 May 2012 12:53:43 -0400	141 lines
Re: multi-threaded SHAPEIT jobs	olivier delaneau	Tue, 15 May 2012 10:07:52 +0100	166 lines
Re: IMPUTE2 --phase option	Audrey GRANT	Tue, 15 May 2012 10:22:32 +0200	50 lines
Re: multi-threaded SHAPEIT jobs	Lipika Ray	Mon, 14 May 2012 20:26:15 -0400	252 lines
QCTOOL -incl-range: Exited with exit code 134	Jie Huang	Tue, 15 May 2012 01:23:32 +0100	318 lines
Re: strand file	Wang, Hongwei	Mon, 14 May 2012 17:21:59 -0700	244 lines
Re: multi-threaded SHAPEIT jobs	Sarah Nelson	Mon, 14 May 2012 17:17:16 -0700	261 lines
Re: multi-threaded SHAPEIT jobs	Latchezar (Lucho) Dimitrov	Tue, 15 May 2012 00:06:14 +0000	189 lines
Re: multi-threaded SHAPEIT jobs	Lipika Ray	Mon, 14 May 2012 19:57:11 -0400	142 lines
multi-threaded SHAPEIT jobs	Sarah Nelson	Mon, 14 May 2012 16:38:08 -0700	135 lines
Re: strand file	Bryan Howie	Mon, 14 May 2012 19:10:54 -0400	124 lines
strand file	Wang, Hongwei	Mon, 14 May 2012 15:25:53 -0700	115 lines
Re: IMPUTE2 --phase option	Audrey GRANT	Mon, 14 May 2012 14:43:33 +0200	68 lines
IMPUTE2 --phase option	Audrey GRANT	Mon, 14 May 2012 14:14:39 +0200	28 lines
Re: still a problem with gtool conversion to ped/map	Gavin Band	Thu, 10 May 2012 15:43:35 +0000	530 lines
Re: still a problem with gtool conversion to ped/map	Stephen Newhouse	Thu, 10 May 2012 16:28:34 +0100	574 lines
still a problem with gtool conversion to ped/map	Stephane Bourgeois	Thu, 10 May 2012 16:16:30 +0100	522 lines
Re: Gtool conversion to ped/map	Jonathan Marchini	Thu, 10 May 2012 12:56:43 +0100	139 lines
Gtool conversion to ped/map	Stephane Bourgeois	Thu, 10 May 2012 12:42:32 +0100	301 lines
Re: sample number error in QCTool	Stephane Bourgeois	Wed, 9 May 2012 14:10:22 +0100	613 lines
Re: SNPTEST question	Gavin Band	Wed, 9 May 2012 12:40:19 +0000	174 lines
Re: sample number error in QCTool	Gavin Band	Wed, 9 May 2012 12:23:26 +0000	313 lines
sample number error in QCTool	Stephane Bourgeois	Wed, 9 May 2012 11:24:21 +0100	332 lines
Re: SHAPEIT gets stuck but there is no error message	olivier delaneau	Tue, 8 May 2012 21:14:01 +0100	101 lines
Re: IMPUTE2 runtime scaling	Bryan Howie	Tue, 8 May 2012 14:10:43 -0500	235 lines
Re: IMPUTE2 runtime scaling	Sarah Nelson	Tue, 8 May 2012 11:58:15 -0700	277 lines
Re: IMPUTE2 runtime scaling	Bryan Howie	Tue, 8 May 2012 13:00:24 -0500	139 lines
IMPUTE2 runtime scaling	Sarah Nelson	Tue, 8 May 2012 10:50:37 -0700	147 lines
SHAPEIT gets stuck but there is no error message	Audrey GRANT	Tue, 8 May 2012 19:41:09 +0200	8994 lines
QCTOOL: chr01.chunk01?	Jie Huang	Tue, 8 May 2012 18:34:50 +0100	493 lines
Re: SNPTEST question	Klaudia Walter	Tue, 8 May 2012 18:25:22 +0100	147 lines
Re: SNPTEST question	Gavin Band	Tue, 8 May 2012 16:48:37 +0000	131 lines
Re: QCTOOL: terminate called after throwing an instance of 'boost::filesystem3::filesystem_error	Jie Huang	Tue, 8 May 2012 15:37:54 +0100	416 lines
Re: SNPTEST question	Klaudia Walter	Tue, 8 May 2012 15:26:04 +0100	2664 lines
Re: QCTOOL: terminate called after throwing an instance of 'boost::filesystem3::filesystem_error	Gavin Band	Tue, 8 May 2012 11:23:00 +0000	204 lines
QCTOOL: terminate called after throwing an instance of 'boost::filesystem3::filesystem_error	Jie Huang	Tue, 8 May 2012 07:16:32 +0100	512 lines
Re: empty map files and only first six ped columns when converting to plink format using Gtool	Stephane Bourgeois	Fri, 4 May 2012 13:25:46 +0100	265 lines
empty map files and only first six ped columns when converting to plink format using Gtool	Stephane Bourgeois	Fri, 4 May 2012 13:20:04 +0100	195 lines
Re: Impute 2 phasing?	Bryan Howie	Wed, 2 May 2012 14:25:16 -0500	155 lines
Re: SNP exclusion list written by -write-snp-excl-list in QCTool	Gavin Band	Wed, 2 May 2012 15:02:45 +0000	262 lines
Impute 2 phasing?	Sophia	Wed, 2 May 2012 10:47:58 -0400	47 lines
SNP exclusion list written by -write-snp-excl-list in QCTool	Stephane Bourgeois	Wed, 2 May 2012 14:23:22 +0100	412 lines