Hi,
I was registering the functional data to the T1 using flirt, but I was passing the whole 4D data directly as input. I did something like this:
flirt -in func.nii.gz -ref T1.nii.gz -omat func2anat.mat -o func_flirt.nii.gz -cost corratio -dof 6
In this case, does anyone know which functional volume is being taken to perform the registration to the T1?
Thanks!
########################################################################
To unsubscribe from the FSL list, click the following link:
https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=FSL&A=1
|