Hi - it may be an illegal .fsf file for 4.1 - if you load it into the
GUI, open the model part of the GUI, close that and resave the
design.fsf, hopefully it will be fixed.
Cheers.
On 22 Oct 2008, at 05:10, Nick Wymbs wrote:
> Hi -
>
> I receive the following error, listed below, when I try to run feat
> from the command line using the .fsf file. This problem has arisen
> after updating to 4.1. If I copy the fslmaths command directly to my
> shell it runs without a problem. Any leads would be greatly
> appreciated!
>
>
> Thanks
> Nick
>
>
> /usr/local/fsl/bin/fslmaths prefiltered_func_data_mcf -mas mask
> prefiltered_func_data_thresh
> syntax error in expression "( /usr/local/fsl/bin/fslstats
> prefiltered_func_data_mcf -k m...": unexpected operator /
>
> while executing
> "expr ( $median_intensity - $int2 ) * 0.75 "
> (procedure "feat5:proc_prestats" line 389)
> invoked from within
> "feat5:proc_prestats $session "
> ("-prestats" arm line 2)
>
> invoked from within
> "switch -- [ lindex $argv $argindex ] {
>
> -I {
> incr argindex 1
> set session [ lindex $argv $argindex ]
> }
>
> -D {
> incr argindex 1
> set..."
>
> ("for" body line 2)
> invoked from within
> "for { set argindex 1 } { $argindex < $argc } { incr argindex 1 } {
> switch -- [ lindex $argv $argindex ] {
>
> -I {
> incr argindex 1
>
> set ses..."
> (file "/usr/local/fsl/bin/feat" line 137)
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
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