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[git/cctbx] master: fetch_pdb: use http instead of https for rcsb; delete old commented out url (59a15106d)
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Thu, 29 Jun 2017 21:37:48 -0700 |
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[git/cctbx] master: GUI: fix for some gtk warnings (89cc4356a)
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Thu, 29 Jun 2017 14:41:51 -0700 |
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[git/cctbx] master: Bug fix: apply origin shift otherwise applying soft mask results in nonsese (because mask always has origin at zero). (61e32d296)
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Thu, 29 Jun 2017 10:33:53 -0700 |
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[git/cctbx] master: Clean clutter (4db980f8d)
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Thu, 29 Jun 2017 09:41:30 +0100 |
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[git/cctbx] master: If not template; print FIXME do not fail (8706058e1)
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Thu, 29 Jun 2017 09:41:30 +0100 |
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[git/cctbx] master: Subtract PEDESTAL (87b2ce3b9)
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Thu, 29 Jun 2017 09:41:30 +0100 |
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[git/cctbx] master: Intermediate changes to support the status tab without isoforms (d7f3fd29d)
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Wed, 28 Jun 2017 21:01:45 -0700 |
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[git/cctbx] master: Refactor and improve readability of unit cell histograms (9ab3984e2)
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Wed, 28 Jun 2017 16:17:34 -0700 |
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[git/cctbx] master: XFEL gui change regarding logging and deleting db entries. (ddf52f9dc)
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Wed, 28 Jun 2017 15:07:47 -0700 |
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[git/cctbx] master: add option to not store bulky objects (590f069e9)
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Wed, 28 Jun 2017 13:22:17 -0700 |
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[git/cctbx] master: Drop print statements (6fc2b3f7c)
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Wed, 28 Jun 2017 11:06:05 -0700 |
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[git/cctbx] master: Bugfix (9eef78a64)
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Wed, 28 Jun 2017 10:50:50 -0700 |
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[git/cctbx] master: Getting closer for the XFEL gui to support non-isoform run stats. (8c650772b)
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Wed, 28 Jun 2017 09:29:54 -0700 |
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[git/cctbx] master: Update README.md (35b863f00)
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Wed, 28 Jun 2017 15:15:21 +0100 |
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[git/cctbx] master: new url for fetching fasta files (40815567e)
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Wed, 28 Jun 2017 14:49:27 +0100 |
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Jenkins 5a cctbx Tests build 4658 Fixed
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Wed, 28 Jun 2017 01:48:35 +0100 |
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[git/cctbx] master: Clean clutter, remove syntax error (cfb177923)
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Tue, 27 Jun 2017 17:35:33 -0700 |
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Jenkins 5a cctbx Tests build 4657 Unstable
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Tue, 27 Jun 2017 23:43:37 +0100 |
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[git/cctbx] master: simtbx: added random orientation feature (daaccaffb)
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Tue, 27 Jun 2017 15:35:57 -0700 |
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[git/cctbx] master: XFEL UI set up to be able to dump images. (26b1bfb90)
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Tue, 27 Jun 2017 13:40:55 -0700 |
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[git/cctbx] master: Bugfixes (3f0fc1598)
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Tue, 27 Jun 2017 13:36:08 -0700 |
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[git/cctbx] master: Initial work to break dependency of XFUI ui on logging stats from a trial having isoforms. (0af682aaf)
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Tue, 27 Jun 2017 13:30:09 -0700 |
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[git/cctbx] master: fixed reindexing bug in IOTA-DIALS (b42198ab9)
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Tue, 27 Jun 2017 12:58:18 -0700 |
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[git/cctbx] master: Revert pull request #44, "Add recognition of skipped tests to run_tests_parallel" (e809a7315)
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Tue, 27 Jun 2017 12:11:11 -0700 |
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[git/cctbx] master: XFEL UI bugfix (1e4c33a57)
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Tue, 27 Jun 2017 11:45:10 -0700 |
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[git/cctbx] master: XFEL UI: also resize any dialogs for smaller screens. (5a83571be)
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Tue, 27 Jun 2017 11:17:10 -0700 |
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[git/cctbx] master: Minor output changes (807ad44f1)
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Tue, 27 Jun 2017 11:18:05 -0600 |
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[git/cctbx] master: Add some details to detector model for Gatan OneView (669c38f93)
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Tue, 27 Jun 2017 15:47:00 +0100 |
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duplicate spam
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Markus Gerstel |
Tue, 27 Jun 2017 07:30:24 +0000 |
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[git/cctbx] master: Add skipping to libtbx.run_parallel_tests runner (8f3ff10df)
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Tue, 27 Jun 2017 08:10:37 +0100 |
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[git/cctbx] master: XFEL UI: fixed sizing to accommodate smaller screens. (80e4992b7)
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Tue, 27 Jun 2017 08:10:37 +0100 |
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[git/cctbx] master: Minor refactoring in parallel test runner (ab3f087b3)
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Tue, 27 Jun 2017 08:10:37 +0100 |
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[git/cctbx] master: Better wording (584740b3b)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: Bugfix. Proper processing of DNA/RNA resnames. (2621ef9d6)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: Mtriage: change phil type and caption for radius_smooth so that it appears correctly in GUI (62f3c9ae7)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: Increase tolerance. (43c58ebbb)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: Using from_ca procedure to filter sheets (9c038cdcf)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: Switching sheet filtering procedure to from_ca method becuase of incorrect working of ksdssp. (c3a54f6d2)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: Format support for Gatan Digital Micrograph (DM4) image stacks (ea535c070)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: comment out debug writing (22c3e4351)
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Tue, 27 Jun 2017 08:10:36 +0100 |
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[git/cctbx] master: Fix minor bug..failure to set auto_sharpen (a2053a977)
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Tue, 27 Jun 2017 08:10:35 +0100 |
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[git/cctbx] master: encode pytest meta-information such as test names in objects, and therefore use proper test names in result file (5f6cb0503)
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Tue, 27 Jun 2017 08:10:35 +0100 |
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[git/cctbx] master: tiny fix for pytest integration (40d5a7b41)
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Tue, 27 Jun 2017 08:10:35 +0100 |
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[git/cctbx] master: Allow soft mask throughout (default off) (f474ef957)
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Tue, 27 Jun 2017 08:10:35 +0100 |
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[git/cctbx] master: check image size during the understand call (e9cc8fddf)
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Tue, 27 Jun 2017 08:10:35 +0100 |
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[git/cctbx] master: Add a read_float32 function. Note, none of the read_* functions are explicitly tested (they should be) (cf7180867)
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Tue, 27 Jun 2017 08:10:35 +0100 |
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[git/cctbx] master: Declare class at top of file to make pytests run with nproc!=1 (af9f1fd43)
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Tue, 27 Jun 2017 08:10:35 +0100 |
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[git/cctbx] master: mask inversion bug fix in GUI (10f775495)
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Tue, 27 Jun 2017 08:10:34 +0100 |
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[git/cctbx] master: simtbx: added Brunger xfel diffraction example. also bug fixes. (c15f142f9)
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Tue, 27 Jun 2017 08:10:34 +0100 |
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[git/cctbx] master: Base: prevent linking against SELinux libraries; improves binary installation compatibility with Linux distributions without SELinux (be8f50774)
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Tue, 27 Jun 2017 08:10:34 +0100 |
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[git/cctbx] master: Fixed default directory path for CBFlib temp file redirect (444d792cf)
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Tue, 27 Jun 2017 08:10:34 +0100 |
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[git/cctbx] master: XFEL UI: fixed sizing to accommodate smaller screens. (103ce1cd4)
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Mon, 26 Jun 2017 19:03:46 -0700 |
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[git/cctbx] master: Minor refactoring in parallel test runner (e0c14ceec)
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Mon, 26 Jun 2017 18:08:53 -0700 |
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[git/cctbx] master: Add skipping to libtbx.run_parallel_tests runner (b8ae853dd)
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Mon, 26 Jun 2017 18:08:53 -0700 |
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[git/cctbx] master: comment out debug writing (5521e3350)
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Mon, 26 Jun 2017 17:16:52 -0700 |
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[git/cctbx] master: Mtriage: change phil type and caption for radius_smooth so that it appears correctly in GUI (214ae6c61)
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Mon, 26 Jun 2017 16:35:19 -0700 |
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[git/cctbx] master: Increase tolerance. (e95e616d3)
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Mon, 26 Jun 2017 16:01:08 -0700 |
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[git/cctbx] master: Switching sheet filtering procedure to from_ca method becuase of incorrect working of ksdssp. (083692cce)
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Mon, 26 Jun 2017 14:08:00 -0700 |
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[git/cctbx] master: Using from_ca procedure to filter sheets (8eedbd88c)
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Mon, 26 Jun 2017 14:07:43 -0700 |
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[git/cctbx] master: Bugfix. Proper processing of DNA/RNA resnames. (7ea29d362)
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Mon, 26 Jun 2017 12:33:13 -0700 |
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[git/cctbx] master: Delete model_nophase.mtz (695052394)
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Mon, 26 Jun 2017 11:24:43 -0700 |
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[git/cctbx] master: Delete F4_0_00008.mccd (43ccef77b)
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Mon, 26 Jun 2017 11:24:15 -0700 |
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[git/cctbx] master: Better wording (4d035656f)
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Mon, 26 Jun 2017 16:27:36 +0100 |
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[git/cctbx] master: Format support for Gatan Digital Micrograph (DM4) image stacks (2c189f36a)
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Mon, 26 Jun 2017 16:27:36 +0100 |
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[git/cctbx] master: Declare class at top of file to make pytests run with nproc!=1 (d3ca80a22)
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Mon, 26 Jun 2017 16:04:32 +0100 |
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[git/cctbx] master: tiny fix for pytest integration (545922c09)
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Mon, 26 Jun 2017 15:28:16 +0100 |
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[git/cctbx] master: Add a read_float32 function. Note, none of the read_* functions are explicitly tested (they should be) (25022e703)
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Mon, 26 Jun 2017 15:17:28 +0100 |
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[git/cctbx] master: encode pytest meta-information such as test names in objects, and therefore use proper test names in result file (c6536216b)
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Mon, 26 Jun 2017 15:06:27 +0100 |
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[git/cctbx] master: check image size during the understand call (368b0cd9a)
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Mon, 26 Jun 2017 14:30:37 +0100 |
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[git/cctbx] master: Fix minor bug..failure to set auto_sharpen (9176c9859)
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Sun, 25 Jun 2017 10:42:20 -0600 |
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[git/cctbx] master: Allow soft mask throughout (default off) (cd5574247)
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Sun, 25 Jun 2017 10:14:53 -0600 |
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[git/cctbx] master: Base: prevent linking against SELinux libraries; improves binary installation compatibility with Linux distributions without SELinux (2da51c59c)
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Fri, 23 Jun 2017 17:00:57 -0700 |
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[git/cctbx] master: mask inversion bug fix in GUI (b3d5c84e9)
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Fri, 23 Jun 2017 15:31:50 -0700 |
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[git/cctbx] master: Fixed default directory path for CBFlib temp file redirect (e32028fe3)
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Fri, 23 Jun 2017 15:23:09 -0700 |
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[git/cctbx] master: simtbx: added Brunger xfel diffraction example. also bug fixes. (b0f964682)
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Fri, 23 Jun 2017 14:22:28 -0700 |
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[git/cctbx] master: Bugfix (c32f47c0b)
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Fri, 23 Jun 2017 14:19:52 -0700 |
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[git/cctbx] master: Add job restart function to XFEL UI. (0474bcec5)
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Fri, 23 Jun 2017 14:19:36 -0700 |
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[git/cctbx] master: Merge branch 'master' of https://github.com/cctbx/cctbx_project (970af6d14)
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Fri, 23 Jun 2017 13:36:16 -0700 |
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[git/cctbx] master: Add ability to delete jobs in the XFEL gui. (3d8d089e1)
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Fri, 23 Jun 2017 13:09:49 -0700 |
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[git/cctbx] master: Added temporary path for CBFlib file as output.tmp_output_dir (e9cc1b8b8)
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Fri, 23 Jun 2017 11:53:17 -0700 |
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[git/cctbx] master: Bugfix (e687c2e30)
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Thu, 22 Jun 2017 16:58:12 -0700 |
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[git/cctbx] master: fixed exit / abort procedure - bugfix (903a2c04a)
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Thu, 22 Jun 2017 16:47:17 -0700 |
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[git/cctbx] master: fixed exit / abort procedure (a12396a3e)
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Thu, 22 Jun 2017 15:56:52 -0700 |
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[git/cctbx] master: Move back accidently removed line (2eeda4a00)
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Thu, 22 Jun 2017 14:54:06 -0700 |
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[git/cctbx] master: Replace Sorry with warning. This will not completely fail on a file with bogus arrays. Instead it will skip bad ones and keep and output good ones. (c6527f79b)
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Thu, 22 Jun 2017 14:40:16 -0700 |
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[git/cctbx] master: removed some broken and usless env python and mods (0debd414e)
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Thu, 22 Jun 2017 14:25:32 -0700 |
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[git/cctbx] master: removed some broken and usless env python (42884e1d3)
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Thu, 22 Jun 2017 14:25:31 -0700 |
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[git/cctbx] master: Update segment_and_split to scale map and structure factors (11e1c0eb2)
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Thu, 22 Jun 2017 12:39:28 -0600 |
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[git/cctbx] master: Hook up Stop job button (1f550fd16)
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Thu, 22 Jun 2017 11:01:10 -0700 |
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[git/cctbx] master: Preserve selection when refreshing job list (5a19f56b4)
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Thu, 22 Jun 2017 10:39:58 -0700 |
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[git/cctbx] master: Fix job list to not reset when it is updated. Also rename Kill All to Stop job. (605a477d2)
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Thu, 22 Jun 2017 10:06:03 -0700 |
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[git/cctbx] master: Simple class for stoping LSF jobs in the XFEL ui (bb8e6626e)
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Thu, 22 Jun 2017 09:00:30 -0700 |
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[git/cctbx] master: remove idiosyncracy, display summary even when CTRL+C'd with nproc>1 (4b6a8d4c0)
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Thu, 22 Jun 2017 09:54:19 +0100 |
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[git/cctbx] master: Change the way expert_level is determined. (4b35e8c69)
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Thu, 22 Jun 2017 09:48:51 +0100 |
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[git/cctbx] master: Stop tests when CTRL+C pressed (d344df10e)
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Thu, 22 Jun 2017 09:48:50 +0100 |
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[git/cctbx] master: Fixes to allow GPhL converted data to work; fixes dials/dials#376 (79fd58a6d)
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Thu, 22 Jun 2017 07:30:20 +0100 |
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[git/cctbx] master: Centralize model-map FSC calculation (5e561e7ab)
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Wed, 21 Jun 2017 16:48:11 -0700 |
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[git/cctbx] master: Centralize model-map FSC calculation (b0f20c0b8)
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Wed, 21 Jun 2017 16:48:10 -0700 |
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[git/cctbx] master: simtbx: optimizing testing procedure. Try running cctbx_project/simtbx/nanoBragg/tst_nanoBragg_minimal.py . What do you think of the image that results? (587852a5c)
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Wed, 21 Jun 2017 16:24:41 -0700 |
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[git/cctbx] master: simtbx: try running tst_nanoBragg_minimal.py (7b9c1dceb)
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Wed, 21 Jun 2017 16:24:41 -0700 |
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[git/cctbx] master: still don't understand git (bde47c609)
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Wed, 21 Jun 2017 16:24:41 -0700 |
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[git/cctbx] master: MI: histogram equalization of map. Better handling GRM (60f4627db)
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Wed, 21 Jun 2017 14:43:53 -0700 |
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[git/cctbx] master: MI: changing object to work with pdb_h and ss_annotation instead of pdb_inp, because those are needed outside to massage a reference map. (6459866cc)
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Wed, 21 Jun 2017 14:43:53 -0700 |
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[git/cctbx] master: MI: Eliminate possibility of constructing GRM for the second time in minimization procedures (by small rearrangements and removing the code). (e2627765d)
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Wed, 21 Jun 2017 14:43:53 -0700 |
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[git/cctbx] master: Allow soft_mask in auto_sharpening small box (4b35a2d01)
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Wed, 21 Jun 2017 15:13:52 -0600 |
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[git/cctbx] master: Restrict value of box_buffer. (4a097bd9e)
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Wed, 21 Jun 2017 14:09:08 -0700 |
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[git/cctbx] master: bugfix in filter_sheets with test. (5ac0dad29)
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Wed, 21 Jun 2017 11:33:52 -0700 |
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[git/cctbx] master: Fix botched conflict resolution (double added these lines). (f74c4c5fb)
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Wed, 21 Jun 2017 11:00:34 -0700 |
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[git/cctbx] master: Minor fixes in density_select (8a3732a86)
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Wed, 21 Jun 2017 08:07:17 -0600 |
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[git/cctbx] master: Duplicated definition (267d36c7e)
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Wed, 21 Jun 2017 14:42:38 +0100 |
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[git/cctbx] master: Fix get_half_height_width calculation to catch extreme cases (e2afb9ddf)
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Wed, 21 Jun 2017 05:49:35 -0600 |
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[git/cctbx] master: Print pixel to mm strategy (89fb9d128)
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Wed, 21 Jun 2017 10:18:17 +0100 |
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[git/cctbx] master: Fix incorrect usage of flex arrays for C++ <--> Python interconversion. (5993e43e3)
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Tue, 20 Jun 2017 20:13:21 -0700 |
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[git/cctbx] master: improved masking (c8e0fb6ac)
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Tue, 20 Jun 2017 18:31:52 -0700 |
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Jenkins 5a cctbx Tests build 4589 Fixed
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Wed, 21 Jun 2017 01:02:42 +0100 |
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[git/cctbx] master: Phil validation for kapton correction. (4fdbe6c15)
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Tue, 20 Jun 2017 16:51:23 -0700 |
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[git/cctbx] master: Compatible with ISO C++98 (a9b4c9d9d)
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Jenkins 5a cctbx Tests build 4588 Still Failing
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[git/cctbx] master: background scatter, point-spread function and full noise simulation added. (0355a20c6)
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Tue, 20 Jun 2017 16:28:52 -0700 |
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Jenkins 5a cctbx Tests build 4587 Still Failing
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[git/cctbx] master: Include (ca23c3eb5)
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Tue, 20 Jun 2017 16:25:20 -0700 |
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Jenkins 5a cctbx Tests build 4586 Failure
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Wed, 21 Jun 2017 00:18:50 +0100 |
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[git/cctbx] master: Same result, simplified design. (cea46a27c)
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Tue, 20 Jun 2017 16:07:11 -0700 |
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[git/cctbx] master: Hook up Rayonix CBFs to the XFEL gui (ce274c6ef)
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Tue, 20 Jun 2017 12:58:11 -0700 |
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[git/cctbx] master: faster tracking stop (7fb311332)
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Tue, 20 Jun 2017 11:36:35 -0700 |
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[git/cctbx] master: MI: woking with mtz with Fobs to extract 2mFo-DFc map to use as reference. With generic test. (e46907aaa)
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Tue, 20 Jun 2017 10:16:09 -0700 |
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[git/cctbx] master: Bugfix for xtc_process (129e01100)
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Tue, 20 Jun 2017 09:41:31 -0700 |
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[git/cctbx] master: Putative support for not-compressed images in CBF (d5f7222ae)
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Tue, 20 Jun 2017 11:01:35 +0100 |
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[git/cctbx] master: Clean clutter (b2bafd886)
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Tue, 20 Jun 2017 11:01:07 +0100 |
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[git/cctbx] master: limit caching to first 4 MB of file (9335a4b5c)
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Tue, 20 Jun 2017 08:25:51 +0100 |
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[git/cctbx] master: Progress, but panel.h not working yet. (69d2c4efa)
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Mon, 19 Jun 2017 23:52:06 -0700 |
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[git/cctbx] master: Attempt to add __str__ methods to the PxMmStrategy classes and use it when printing panels. (e72e8e59e)
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Mon, 19 Jun 2017 23:08:57 -0700 |
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[git/cctbx] master: point picker and minor tweaks (7ff9a37ce)
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Mon, 19 Jun 2017 16:29:34 -0700 |
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[git/cctbx] master: Comprehensive validation: for real-space correlations, check that the space groups and unit cells match (model and map); if not, map parameters are used (52cc4a8ec)
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Mon, 19 Jun 2017 16:24:41 -0700 |
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[git/cctbx] master: For joint re-integration, rely on dispatch.dump_indexed=True (a86f482dd)
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Mon, 19 Jun 2017 15:37:18 -0700 |
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[git/cctbx] master: For xtc processing, add hook to replace MemImageSet with file-based ImageSet if dispatch.dump_indexed=True (e10573d37)
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Mon, 19 Jun 2017 15:29:21 -0700 |
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[git/cctbx] master: Missing import (30285377f)
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Mon, 19 Jun 2017 14:48:55 -0700 |
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[git/cctbx] master: Add re-prediction of reflections using beta code (61045e33d)
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Mon, 19 Jun 2017 14:46:07 -0700 |
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[git/cctbx] master: silence stray print statement (8baf6b5ba)
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Mon, 19 Jun 2017 12:38:39 -0500 |
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[git/cctbx] master: Actually delete the dictionary entry, and not just a temporary copy of the dictionary entry. (8baf71c54)
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Mon, 19 Jun 2017 11:08:36 +0100 |
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[git/cctbx] master: for dials/dials#380 - trying to make sense of behavoiur for non-coplanar detectors; failing; (e18d82fa2)
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Mon, 19 Jun 2017 07:08:23 +0100 |
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[git/cctbx] master: redefine boundaries for density_select (69e086df5)
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Sat, 17 Jun 2017 16:23:30 -0600 |
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[git/cctbx] master: set sharpening method if b_iso is set (5e518b05d)
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Sat, 17 Jun 2017 13:42:43 -0600 |
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[git/cctbx] master: Update iterated solvent ID (5faa9e960)
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Sat, 17 Jun 2017 12:56:17 -0600 |
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[git/cctbx] master: For dials/dials#378; change proposed by NKS to reduce memory growth done right this time (ed313d07c)
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Sat, 17 Jun 2017 07:54:29 +0100 |
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[git/cctbx] master: Backing out change; broke regular behaviour with not-multi-tile detector; for dials#378 (702e1e9aa)
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Sat, 17 Jun 2017 07:51:29 +0100 |
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[git/cctbx] master: For #378; change proposed by NKS to reduce memory growth (6ac1099e1)
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Sat, 17 Jun 2017 07:47:25 +0100 |
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[git/cctbx] master: For #380; work around DXTBX_ASSERT; should give same result where previously this worked but for non-planar detector result not correct (but previously failed) (2058626cc)
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Sat, 17 Jun 2017 07:40:27 +0100 |
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[git/cctbx] master: Fix bug in auto_sharpen where type of sharpening and resolution cutoffs not properly used (6b2ca4d1c)
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Fri, 16 Jun 2017 20:27:04 -0600 |
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[git/cctbx] master: cleanup (689300b6e)
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Fri, 16 Jun 2017 18:59:37 -0700 |
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[git/cctbx] master: typo (c3eaa52b9)
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Fri, 16 Jun 2017 18:41:02 -0700 |
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[git/cctbx] master: remove unused, unimplemented class (b1940ebb0)
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Fri, 16 Jun 2017 18:41:02 -0700 |
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[git/cctbx] master: Move function to appropriate place and also adding checking for copies. (ef70ed5af)
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Fri, 16 Jun 2017 18:41:02 -0700 |
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[git/cctbx] master: MolProbity GUI: check against None when clicking on multi criterion plot (6f5aa447e)
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Fri, 16 Jun 2017 16:43:07 -0700 |
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[git/cctbx] master: MolProbity GUI: check against None to handle gaps in residue numbering (33f8dc86f)
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Fri, 16 Jun 2017 15:44:14 -0700 |
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[git/cctbx] master: CL parameters to tweak map_model_cc (bf6d50f20)
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Fri, 16 Jun 2017 14:06:58 -0700 |
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[git/cctbx] master: Merge branch 'master' of github.com:cctbx/cctbx_project (c0b277d4f)
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Fri, 16 Jun 2017 13:58:06 -0700 |
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[git/cctbx] master: rearrange calcs to reduce memory impact (6c5323545)
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Fri, 16 Jun 2017 13:58:03 -0700 |
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[git/cctbx] master: fixing file collision (changing temp filename) (6d7ae6c76)
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Fri, 16 Jun 2017 12:26:46 -0700 |
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[git/cctbx] master: Using cctbx internal tools for conversion instead of calling command-line (a2cd96e75)
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Fri, 16 Jun 2017 11:54:59 -0700 |
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[git/cctbx] master: exclude backbone from SF4 linking (d043f65b2)
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Fri, 16 Jun 2017 11:45:25 -0700 |
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[git/cctbx] master: redo method for apply_soft_mask; still off by default (38c6e36b5)
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Fri, 16 Jun 2017 09:02:24 -0600 |
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Jenkins 5a cctbx Tests build 4546 Fixed
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Fri, 16 Jun 2017 15:18:48 +0100 |
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[git/cctbx] master: missed rad_as_deg; for #46 (0bed2b33e)
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Fri, 16 Jun 2017 15:07:34 +0100 |
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Jenkins 5a cctbx Tests build 4545 Unstable
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Fri, 16 Jun 2017 15:06:37 +0100 |
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Jenkins 5a cctbx Tests build 4545 Unstable
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Fri, 16 Jun 2017 15:06:37 +0100 |
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[git/cctbx] master: Disable FormatEigerStream for now, see #41 (d511e2ec3)
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Fri, 16 Jun 2017 15:05:29 +0100 |
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[git/cctbx] master: More stable unit Q to angle map; fixes #43 (3a01a4884)
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Fri, 16 Jun 2017 15:02:06 +0100 |
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[git/cctbx] master: For #43 trap uq[0] > 0; more helpful than just false coming back (d06428ebf)
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Fri, 16 Jun 2017 14:45:06 +0100 |
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[git/cctbx] master: turn off set_mean_to_zero in apply_soft_mask (f3d5c52c7)
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Fri, 16 Jun 2017 07:09:21 -0600 |
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Jenkins 5b cctbx MacOS build 1422 Fixed
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Fri, 16 Jun 2017 09:38:18 +0100 |
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Jenkins 5a cctbx Tests build 4542 Fixed
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Fri, 16 Jun 2017 09:11:15 +0100 |
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[git/cctbx] master: Add iotbx alias for cif_as_pdb; use same in tst xray scale (8268c807a)
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Fri, 16 Jun 2017 09:05:06 +0100 |
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[git/cctbx] master: remove misleading check (ee6a462c6)
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Fri, 16 Jun 2017 08:49:46 +0100 |
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[git/cctbx] master: Option to pickle results in map_model_cc. Cleaning up fsc_model_vs_map to reduce pickle size. (e7b3b490e)
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Thu, 15 Jun 2017 15:38:15 -0700 |
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[git/cctbx] master: use connectivity_object to expand mask (1b911a6c6)
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Thu, 15 Jun 2017 16:12:07 -0600 |
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[git/cctbx] master: Populate kapton corrections to and from cctbx.xfel integration pickle (70c7ea69f)
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Thu, 15 Jun 2017 14:14:34 -0700 |
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Jenkins 5b cctbx MacOS build 1421 Unstable
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Thu, 15 Jun 2017 20:04:28 +0100 |
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Jenkins 5a cctbx Tests build 4536 Unstable
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Thu, 15 Jun 2017 19:50:45 +0100 |
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Jenkins 5a cctbx Tests build 4536 Unstable
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Thu, 15 Jun 2017 19:50:44 +0100 |
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[git/cctbx] master: Making cif behavior exactly the same as pdb (throwing away SCALE records if crystal_symmetry is supplied to obtain xray_structure). With test. (bdf35cf1c)
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Thu, 15 Jun 2017 11:43:57 -0700 |
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[git/cctbx] master: Better precision when writing CBFs (46a0b1690)
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Thu, 15 Jun 2017 11:08:56 -0700 |
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[git/cctbx] master: fetch_pdb: updated base url for rcsb.org (b9b1baca7)
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Thu, 15 Jun 2017 10:30:05 -0700 |
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[git/cctbx] master: Finish hooking up xtc_process to be able to create Rayonix CBFs in memory instead of Rayonix image pickles. (45c45dce4)
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Thu, 15 Jun 2017 10:22:37 -0700 |
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[git/cctbx] master: FormatCBF changes (a5d042a8a)
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Thu, 15 Jun 2017 10:22:36 -0700 |
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[git/cctbx] master: Rescope some cspad cbf-specific parameters and begin adding Rayonix CBFs to xtc_process (82147e8d7)
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Thu, 15 Jun 2017 10:22:36 -0700 |
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[git/cctbx] master: Default of soft_mask off for now (648c312e8)
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Thu, 15 Jun 2017 08:32:58 -0600 |
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[git/cctbx] master: Add simple method to disable all caching, #42 (072d64357)
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Thu, 15 Jun 2017 15:28:11 +0100 |
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[git/cctbx] master: Further logic fix plus test, #42 (9305e8e87)
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Thu, 15 Jun 2017 14:16:40 +0100 |
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[git/cctbx] master: fix logic, #42 (b92c70cbd)
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Thu, 15 Jun 2017 13:49:30 +0100 |
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[git/cctbx] master: Introduce an upper limit for file caches of 40 MB. Any read requests beyond the limit are passed through to the underlying file handle. Fixes #42 (2e9d786ed)
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Thu, 15 Jun 2017 13:22:34 +0100 |
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[git/cctbx] master: Remove another nasty readlines() that was slowing down dials.import (201f8565d)
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Thu, 15 Jun 2017 10:36:03 +0100 |
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[git/cctbx] master: Do not use readlines where a function may be called on a file of arbitrary size. Fixes #40 (53ca59bef)
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Thu, 15 Jun 2017 10:26:20 +0100 |
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[git/cctbx] master: Fix typos (b107f8542)
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Wed, 14 Jun 2017 20:58:39 -0600 |
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[git/cctbx] master: allow soft mask in segment_and_split (80b663b31)
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Wed, 14 Jun 2017 19:56:08 -0600 |
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[git/cctbx] master: added detector thickness loop, still trying to get enum parameters to work. any help? (5f80be261)
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Wed, 14 Jun 2017 18:20:11 -0700 |
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[git/cctbx] master: GUI: dispatchers ignore any existing SSL_CERT_FILE variable; GUI on macOS does not seem to like multiple files defined in SSL_CERT_FILE variable (9bb927901)
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Wed, 14 Jun 2017 17:13:10 -0700 |
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[git/cctbx] master: Fix test. (63011a151)
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Wed, 14 Jun 2017 14:12:20 -0700 |
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[git/cctbx] master: Maybe this will help with IOErrors in the queue (b53d8c420)
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Wed, 14 Jun 2017 13:55:40 -0700 |
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[git/cctbx] master: make it possible to pass pdb.hierarchy object to process (2ba2e2964)
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Wed, 14 Jun 2017 11:22:58 -0700 |
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[git/cctbx] master: using webbrowser module for launching url (5b1e1415d)
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Wed, 14 Jun 2017 17:25:55 +0100 |
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[git/cctbx] master: mask out region outside refining chain (3e028cc53)
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Wed, 14 Jun 2017 06:44:48 -0700 |
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Jenkins 5a cctbx Tests build 4515 Fixed
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Wed, 14 Jun 2017 09:38:35 +0100 |
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[git/cctbx] master: restoring tst_input.map as this is required for 2 tests. If deletion was on purpose feel free to re-delete. (20af76949)
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Wed, 14 Jun 2017 09:32:33 +0100 |
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[git/cctbx] master: go back to is_crystal (bfe3063c8)
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Tue, 13 Jun 2017 21:16:59 -0600 |
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[git/cctbx] master: replace is_crystal with is_a_crystal to make command interpreter work (904598da5)
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Tue, 13 Jun 2017 21:06:33 -0600 |
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Jenkins 5a cctbx Tests build 4511 Unstable
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Tue, 13 Jun 2017 23:29:20 +0100 |
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Jenkins 5a cctbx Tests build 4511 Unstable
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Tue, 13 Jun 2017 23:29:20 +0100 |
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[git/cctbx] master: allow local sharpening with mtz (e5794b39c)
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Tue, 13 Jun 2017 16:23:45 -0600 |
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[git/cctbx] master: XFEL UI: turn off writing radial averages. (c545a8891)
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Tue, 13 Jun 2017 13:52:23 -0700 |
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[git/cctbx] master: minor interface tweaks (b3811828b)
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Tue, 13 Jun 2017 13:17:12 -0700 |
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[git/cctbx] master: XFEL UI: don't split logs. (6d5598e22)
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Tue, 13 Jun 2017 13:16:08 -0700 |
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[git/cctbx] master: fix: for byte-swap version, safety check has to occur _after_ the byte-swap operation (1a1da1525)
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Tue, 13 Jun 2017 12:31:30 +0100 |
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[git/cctbx] master: Safety check before conversion from unsigned int to int, closes #39 (78e3abd1b)
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Tue, 13 Jun 2017 11:58:08 +0100 |
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[git/cctbx] master: Making message visible in t96 (ddf785a5e)
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Mon, 12 Jun 2017 17:16:26 -0700 |
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[git/cctbx] master: Merge branch 'master' into mi_log (16e9e3add)
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Mon, 12 Jun 2017 14:26:08 -0700 |
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[git/cctbx] master: bugfix (63221c268)
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Mon, 12 Jun 2017 14:24:53 -0700 |
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[git/cctbx] master: Option to actually write out .geo if clash_guard is raising Sorry (350dd5aba)
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Mon, 12 Jun 2017 11:59:39 -0700 |
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[git/cctbx] master: Be clearer about bootstrap directory removal (f975415fa)
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Mon, 12 Jun 2017 11:10:47 +0100 |
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[git/cctbx] master: Fix bootstrap exception in python 2.5 (96273178f)
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Mon, 12 Jun 2017 11:10:47 +0100 |
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[git/cctbx] master: Format support for image series in TIA (Emispec) format, used by some FEI microscopes (f1ffad88f)
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Mon, 12 Jun 2017 10:14:53 +0100 |
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[git/cctbx] master: MI: use user-supplied map for initial GM (8bb72211b)
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Fri, 9 Jun 2017 16:48:12 -0700 |
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[git/cctbx] master: Safeguarding (90f7a81a9)
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Fri, 9 Jun 2017 12:40:50 -0700 |
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[git/cctbx] master: Putative fix for dials#370; include fix for two-theta offsets (4900c63a3)
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Fri, 9 Jun 2017 07:08:14 +0100 |
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[git/cctbx] master: set value outside mask to mean inside (a6c6df16e)
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Thu, 8 Jun 2017 21:46:45 -0600 |
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[git/cctbx] master: pdb_iterpretation: remove "not recommended" text (8ee5535c8)
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Thu, 8 Jun 2017 11:40:27 -0700 |
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[git/cctbx] master: don't use hot in qrefine builder (357be8bde)
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Wed, 7 Jun 2017 21:16:03 -0700 |
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[git/cctbx] master: GUI: set peptide_link section to display automatically (b600b7177)
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Wed, 7 Jun 2017 16:35:01 -0700 |
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[git/cctbx] master: Update indexing ambiguity cluster plot (1d052316f)
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Wed, 7 Jun 2017 15:17:18 -0700 |
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[git/cctbx] master: Fix bug variable. (2b39145b3)
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Wed, 7 Jun 2017 15:14:50 -0700 |
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[git/cctbx] master: Getting closer using PhenixBuilder (22221f6cb)
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Wed, 7 Jun 2017 02:43:53 -0700 |
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[git/cctbx] master: Getting better... (60061f9db)
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Wed, 7 Jun 2017 02:19:45 -0700 |
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[git/cctbx] master: Superclass from Phenix (4da6ead91)
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Wed, 7 Jun 2017 00:59:49 -0700 |
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[git/cctbx] master: Added pip modules (3f8a199c6)
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Wed, 7 Jun 2017 00:45:23 -0700 |
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[git/cctbx] master: Moved and changed QRefine builder (d2ebf3560)
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Wed, 7 Jun 2017 00:30:17 -0700 |
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[git/cctbx] master: Working with external map and test (a0132f189)
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Tue, 6 Jun 2017 17:38:19 -0700 |
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[git/cctbx] master: Bugfix and cleanup (a259802ca)
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Tue, 6 Jun 2017 17:38:19 -0700 |
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[git/cctbx] master: loop idealization: option to tweak rmsds (facfffb64)
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Tue, 6 Jun 2017 17:38:19 -0700 |
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[git/cctbx] master: fix bug in clear_empty_lines just created (fee62dd2a)
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Tue, 6 Jun 2017 15:35:18 -0600 |
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[git/cctbx] master: Mtriage: set default value for data_min; set data_max to max (d446782d9)
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Tue, 6 Jun 2017 13:23:24 -0700 |
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[git/cctbx] master: allow lines with >>> and nothing else in guess_chain_types_from_sequences (57b5e0ecb)
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Tue, 6 Jun 2017 13:00:26 -0600 |
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[git/cctbx] master: Mtriage: reapply required changes for existing GUI (363109fa4)
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Mon, 5 Jun 2017 17:09:03 -0700 |
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[git/cctbx] master: Superficial/usability changes to the striping program. (edd72fcb9)
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Mon, 5 Jun 2017 15:13:53 -0700 |
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[git/cctbx] master: Moved kapton from cctbx to dials, so use a try/except when importing. (f6e986ed1)
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Mon, 5 Jun 2017 15:10:27 -0700 |
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[git/cctbx] master: MI: More information in pickle file. (56e771fc8)
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Mon, 5 Jun 2017 14:36:59 -0700 |
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[git/cctbx] master: Set defaults for local_sharpening (e8e332707)
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Mon, 5 Jun 2017 14:59:06 -0600 |
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[git/cctbx] master: Use average beam center for calculation of tile transformations (ddc65c568)
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Mon, 5 Jun 2017 11:09:22 -0700 |
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[git/cctbx] master: Temporary message in test. (038802901)
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Mon, 5 Jun 2017 09:14:20 -0700 |
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[git/cctbx] master: Update list of tests (a2ff18f71)
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Mon, 5 Jun 2017 09:09:53 -0700 |
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[git/cctbx] master: Update precision in output (2e0eab4aa)
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Mon, 5 Jun 2017 08:31:36 -0700 |
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[git/cctbx] master: Update comments (97292eac8)
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Mon, 5 Jun 2017 08:28:32 -0700 |
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Mon, 5 Jun 2017 07:42:40 +0000 |
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[git/cctbx] master: Refactoring to better separate CL, GUI and library code. Add more statistics to results object. (6c331c032)
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Sat, 3 Jun 2017 14:41:27 +0800 |
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[git/cctbx] master: Polder: updated modifications for GUI (c21336480)
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Fri, 2 Jun 2017 13:21:54 -0700 |
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[git/cctbx] master: Temporarily disable test. (f175fd59f)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 13:11:06 -0700 |
71 lines |
[git/cctbx] master: Determine more parameters to prevent occasional failures (394a5e217)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 10:36:27 -0700 |
103 lines |
[git/cctbx] master: Trying to work around excessive special position correction error in rotamer fixing (670739b36)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 10:36:27 -0700 |
146 lines |
[git/cctbx] master: removing unnecessary objects from object which is being pickled. (a538d5303)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 10:36:27 -0700 |
130 lines |
[git/cctbx] master: Working with cifs in process_cmd_with files, used in MI (99bdd4607)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 10:36:27 -0700 |
121 lines |
[git/cctbx] master: Bugfix for bond adding in GRM. (7a2c4839e)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 10:36:27 -0700 |
199 lines |
[git/cctbx] master: using None for unconditional_general_position_flags (1b5826de0)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 10:36:27 -0700 |
119 lines |
[git/cctbx] master: Add missing shebang to bootstrap script (58c8a3003)
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CCTBX Commit via DLS Jenkins |
Fri, 2 Jun 2017 17:09:06 +0100 |
68 lines |
[git/cctbx] master: Update list of tests mmtbx. (612230e1e)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 16:50:39 -0700 |
69 lines |
[git/cctbx] master: Fixing typo. (dd6e3149b)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 16:49:43 -0700 |
75 lines |
[git/cctbx] master: Polder: add test for different values for sphere_radius and box_buffer. (d77963949)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 16:40:47 -0700 |
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[git/cctbx] master: Mtriage: modifications for GUI (dc1011412)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 16:39:10 -0700 |
462 lines |
[git/cctbx] master: Generalised path string to be OS independent (1d7fe3a3b)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 14:48:32 -0700 |
108 lines |
[git/cctbx] master: Redirected CBFlib temp file output to output_dir/.tmp for xtc_process (5026d164e)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 14:35:22 -0700 |
94 lines |
[git/cctbx] master: Redirected CBFlib temp file output to output_dir/.tmp for xtc_dump (a68ec3eb2)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 14:35:22 -0700 |
92 lines |
[git/cctbx] master: Fix serious bugs in local_sharpening method (bfbc17042)
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CCTBX Commit via DLS Jenkins |
Thu, 1 Jun 2017 09:28:33 -0600 |
143 lines |
[git/cctbx] master: Polder: add possibility to choose buffer for box coordinates. (d0809121f)
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CCTBX Commit via DLS Jenkins |
Wed, 31 May 2017 17:09:20 -0700 |
157 lines |
[git/cctbx] master: Cleanup. (09c611e9b)
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CCTBX Commit via DLS Jenkins |
Wed, 31 May 2017 16:54:36 -0700 |
158 lines |