Dear Matthew,
Thank you for giving me the FEEDS 4.1.5 run script. Using it, I now find that FEEDS passes all tests up to and including Melodic. Great!
However, I still have a problem: FIRST fails:
--- part of terminal output from FEEDS:
Starting FIRST at Tue Sep 20 10:26:23 EDT 2011
No output image created
Warning - test failed!
... [FDT (bedpost) works fine] ...
---- end
The problem seems to be that fsl/data directory does not contain a "first" subdirectory. results/LOG includes:
"... /usr/share/fsl/data/first/models_336_bin/L_Hipp_bin.bmv
model file not found"
Could you please let me know how to get the directory fsl/data/first?
On another topic, could you comment on why my Melodic output for the FEEDS test is so different from the corresponding output in the feeds/data/fmri.ica ? For example, the eigenvalues_percent files are very different: the one in feeds/data starts with 0.44, while the one in feeds/results starts with 0.51. FEEDS still declares that the Melodic test has passed, based on fslcc.txt, but the allowable errors seem large.
Regards,
Tanya
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