Hi,
I am using two registration steps before segmentation by run_first_all. I have
the matrix (4*4) relating to the first stage affine and also the warp
coefficents (30*30*30) of the second nonlinear registration. I don't want to
register by two stage flirt of FSL. So, I want to apply the segmentation to this
registered image. Is there any method to transform the result of
run_first_all_noflirt (I changes the script for non using flirts for registration) to
native space.
Siamka
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