Hi - can I recommend that you read through the FEAT manual in detail
to cover these issues;
http://fsl.fmrib.ox.ac.uk/fsl/feat5/
Cheers.
On 19 Sep 2007, at 17:53, SAKTHIVEL SEKAR wrote:
> Dear all,
>
> Im a fairly new user to FSL and have got few
> clarification; would be delighted if you can help, please.
>
>
>
> I have got a high resolution (3D) image (256 x 128 x 64) image and
> a (64 x 64 x (32*135)) (i.e. 32slices:135volumes) fMRI (4D time
> series) acquisition, for n number of subjects. I aim to use one of
> the high resolution image as the reference template image and
> obtain the translation matrix, for each of the subject (using its
> corresponding high resolution image).
>
>
>
> I looked to employ FLIRT for this purpose - where registering the
> 3D to 3D was fine. Upon which I aim to apply the derived
> translation matrix on the 4D time series (64 x 64 x 4320)
> acquisition to do the registration.
>
>
>
> And please also include, if there is a possibility to perform
> temporal realignment for each subject (across the 135 volumes) with
> FSL
>
>
>
> Your advice on this, will be very helpful,
>
> Many thanks in advance,
>
> Sak
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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