Dear FMRIB,
I'm getting make errors with FAST and TCL, and many install errors
(which I guess come from the TCL build failure) with other components.
I've uploaded the full build.log -- ID 371787, and attached what I
hope are the relevant portions. Let me know if you need any more info.
By the way, this build log is from just "build extras fast" following
an earlier build of everything which showed errors in just these
components.
And by the by the way... If I remember correctly, the first build
began with something like "error: no rule to make target distclean"
which seems to have stopped occuring on subsequent builds; presumably
that's nothing to worry about though?
Other info that might help:
32-bit Intel Pentium 4
Red Hat Enterprise Linux WS release 3 (Taroon Update 9)
Linux 2.4.21-47.0.1.ELsmp #1 SMP i686 i386 GNU/Linux
Thanks in advance,
Ged.
Making project tcl
[...]
gcc -pipe -O2 -DTCL_DBGX= -L/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/lib -Wl,--export-dynamic tclAppInit.o -L/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tcl/unix -ltcl8.4 -ldl -lpthread -lieee -lm \
-o tclsh
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/lib/libtcl8.4.so: file not recognized: File format not recognized
collect2: ld returned 1 exit status
make: *** [tclsh] Error 1
=========================
ERROR::Could not make tcl successfully
Making project tk
[...]
gcc -pipe -c -O2 -Wall -Wno-implicit-int -fno-strict-aliasing -fPIC -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/unix -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/unix/../generic -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/unix/../bitmaps -I/usr/people/cowboy/var/vm-server-7_linux_64-gcc3.4/sandboxes/fsl/extras/src/tcl/generic -I/usr/X11R6/include -DPACKAGE_NAME=\"\" -DPACKAGE_TARNAME=\"\" -DPACKAGE_VERSION=\"\" -DPACKAGE_STRING=\"\" -DPACKAGE_BUGREPORT=\"\" -DSTDC_HEADERS=1 -DHAVE_SYS_TYPES_H=1 -DHAVE_SYS_STAT_H=1 -DHAVE_STDLIB_H=1 -DHAVE_STRING_H=1 -DHAVE_MEMORY_H=1 -DHAVE_STRINGS_H=1 -DHAVE_INTTYPES_H=1 -DHAVE_STDINT_H=1 -DHAVE_UNISTD_H=1 -DHAVE_LIMITS_H=1 -DHAVE_UNISTD_H=1 -DUSE_THREAD_ALLOC=1 -D_REENTRANT=1 -D_THREAD_SAFE=1 -DHAVE_PTHREAD_ATTR_SETSTACKSIZE=1 -DHAVE_PTHREAD_ATFORK=1 -DTCL_THREADS=1 -DPEEK_XCLOSEIM=1 -D_LARGEFILE64_SOURCE=1 -DTCL_WIDE_INT_TYPE=long\ long -DHAVE_STRUCT_STAT64=1 -DHAVE_OPEN64=1 -DHAVE_LSEEK64=1 -DHAVE_TYPE_OFF64_T=1 -DHAVE_SYS_TIME_H=1 -DTIME_WITH_SYS_TIME=1 -DHAVE_PW_GECOS=1 -DTCL_NO_DEPRECATED -DUSE_TCL_STUBS /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/unix/../generic/tk3d.c
In file included from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkInt.h:21,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.h:18,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:16:
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk.h:59:9: #error Tk 8.4 must be compiled with tcl.h from Tcl 8.4
In file included from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkInt.h:21,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.h:18,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:16:
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk.h:326: syntax error before "CONST84"
In file included from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk.h:1563,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkInt.h:21,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.h:18,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:16:
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:145: syntax error before "CONST84"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:237: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:327: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:330: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:412: syntax error before "CONST84"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:479: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:482: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:484: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:487: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:489: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:491: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:494: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:496: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:499: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:501: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:504: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:516: syntax error before "CONST84"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:960: syntax error before "CONST84"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:986: syntax error before "CONST84_RETURN"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:986: warning: no semicolon at end of struct or union
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1014: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1015: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1039: syntax error before "CONST84"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1061: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1062: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1063: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1064: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1065: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1066: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1067: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1068: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1069: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1070: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1071: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1074: syntax error before "CONST84"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1196: syntax error before '}' token
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1196: warning: data definition has no type or storage class
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1201: syntax error before '*' token
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:1201: warning: data definition has no type or storage class
In file included from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkPort.h:34,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkInt.h:27,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.h:18,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:16:
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/unix/tkUnixPort.h:210:20: tclInt.h: No such file or directory
In file included from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkInt.h:975,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.h:18,
from /cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:16:
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkIntDecls.h:144: syntax error before "char"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkIntDecls.h:609: syntax error before "CONST84_RETURN"
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkIntDecls.h:609: warning: no semicolon at end of struct or union
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkIntDecls.h:850: syntax error before '}' token
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkIntDecls.h:850: warning: data definition has no type or storage class
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkIntDecls.h:855: syntax error before '*' token
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkIntDecls.h:855: warning: data definition has no type or storage class
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:329: conflicting types for `Tk_NameOf3DBorder'
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:480: previous declaration of `Tk_NameOf3DBorder'
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c: In function `Tk_GetReliefFromObj':
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:630: warning: passing arg 3 of pointer to function from incompatible pointer type
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c: At top level:
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tk3d.c:708: conflicting types for `Tk_NameOfRelief'
/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/src/tk/generic/tkDecls.h:504: previous declaration of `Tk_NameOfRelief'
make: *** [tk3d.o] Error 1
=========================
ERROR::Could not make tk successfully
Making project src/fast
[...]
c++ -Wall -ansi -pedantic -march=pentium -mcpu=pentium -O -Izimage/common -Izimage/fundamental -Izimage/imagebase -Izimage/imageio -Izimage/imageprocess -Izimage/math -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/include -I. -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/include -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/include -c mriseg.cpp
In file included from /usr/include/c++/3.2.3/cmath:461,
from zimage/imageprocess/vclassification.cpp:97,
from mriseg.cpp:94:
zimage/math/matrix.h: In function `float det(const ZMatrix<T>&) [with T =
float]':
zimage/common/commfunc.h:24: instantiated from `T Abs(const T&) [with T = float]'
/usr/include/c++/3.2.3/cmath:461: instantiated from here
zimage/math/matrix.h:212: no matching function for call to `LUdcmp(
ZMatrix<float>&, float*&)'
zimage/math/mathcommon.h:27: candidates are: bool LUdcmp(ZMatrix<double>&)
zimage/math/mathcommon.h:28: bool LUdcmp(ZMatrix<double>&,
ZVector<int>&)
zimage/math/mathcommon.h:29: bool LUdcmp(ZMatrix<float>&)
zimage/math/mathcommon.h:30: bool LUdcmp(ZMatrix<float>&,
ZVector<int>&)
make: *** [mriseg.o] Error 1
c++ -Wall -ansi -pedantic -march=pentium -mcpu=pentium -O -Izimage/common -Izimage/fundamental -Izimage/imagebase -Izimage/imageio -Izimage/imageprocess -Izimage/math -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/include -I. -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/include -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/include -c mfast.cpp
c++ -Wall -ansi -pedantic -march=pentium -mcpu=pentium -O -Izimage/common -Izimage/fundamental -Izimage/imagebase -Izimage/imageio -Izimage/imageprocess -Izimage/math -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/extras/include -I. -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/include -I/cs/research/medic/home0/paramedic/gridgway/C1/src/fsl-4/fsl-4.0.1_32bit/include -c mmriseg.cpp
In file included from /usr/include/c++/3.2.3/cmath:461,
from zimage/imageprocess/vclassification.cpp:97,
from mmriseg.cpp:93:
zimage/math/matrix.h: In function `float det(const ZMatrix<T>&) [with T =
float]':
zimage/common/commfunc.h:24: instantiated from `T Abs(const T&) [with T = float]'
/usr/include/c++/3.2.3/cmath:461: instantiated from here
zimage/math/matrix.h:212: no matching function for call to `LUdcmp(
ZMatrix<float>&, float*&)'
zimage/math/mathcommon.h:27: candidates are: bool LUdcmp(ZMatrix<double>&)
zimage/math/mathcommon.h:28: bool LUdcmp(ZMatrix<double>&,
ZVector<int>&)
zimage/math/mathcommon.h:29: bool LUdcmp(ZMatrix<float>&)
zimage/math/mathcommon.h:30: bool LUdcmp(ZMatrix<float>&,
ZVector<int>&)
make: *** [mmriseg.o] Error 1
make: Target `all' not remade because of errors.
=========================
ERROR::Could not make fast successfully
|