Hi RELION developers,
I have noticed in relion_image_handler module, there are three option --avg_ampl --avg_ampl2 --avg_ampl2_ali and from the description, it seems being able to generate average power spectrum. However, when I quickly tried with my particle star files with any one of these options specified, the output was not anything meaningful. Also the size becomes different from the particle size (400 X 400) and the output spectrum is with the size (210 X 400), which seems confusing. I am wondering if this is a fully developed function or did I do something wrong?
Best,
Yangqi
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