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August 2019

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Subject	From	Date	Size
Calculating average power spectrum with relion_image_handler?	Yangqi Gu	Thu, 1 Aug 2019 03:53:18 +0100	27 lines
Re: Calculating average power spectrum with relion_image_handler?	Takanori Nakane	Thu, 1 Aug 2019 11:31:58 +0100	52 lines
Re: Calculating average power spectrum with relion_image_handler?	Yangqi Gu	Thu, 1 Aug 2019 09:40:11 -0400	1658 lines
Re: Calculating average power spectrum with relion_image_handler?	Takanori Nakane	Thu, 1 Aug 2019 14:45:13 +0100	85 lines
Re: Calculating average power spectrum withrelion_image_handler?	BuddySphinx	Thu, 1 Aug 2019 09:46:21 -0400	231 lines
Re: Calculating average power spectrum withrelion_image_handler?	BuddySphinx	Thu, 1 Aug 2019 09:51:17 -0400	234 lines
Re: Calculating average power spectrum withrelion_image_handler?	Takanori Nakane	Thu, 1 Aug 2019 15:05:18 +0100	120 lines
Does CTF resolution matter to classification and reconstruction?	Yangqi Gu	Thu, 1 Aug 2019 15:25:54 +0100	26 lines
Re: Does CTF resolution matter to classification and reconstruction?	Takanori Nakane	Thu, 1 Aug 2019 15:32:18 +0100	44 lines
Relion 3.0 Motion Correction error	Narashima Kumar	Thu, 1 Aug 2019 09:40:28 -0700	66 lines
Re: Relion 3.0 Motion Correction error	Takanori Nakane	Thu, 1 Aug 2019 17:56:30 +0100	54 lines
positions available in Oxford	<>	Thu, 1 Aug 2019 11:36:17 -0700	215 lines
Re: Compiling RELION3 for TIFF files	Narasimha Kumar	Fri, 2 Aug 2019 02:30:48 +0100	17 lines
Re: Compiling RELION3 for TIFF files	Sjors Scheres	Sun, 4 Aug 2019 10:20:17 +0100	54 lines
3D classification RELION 3.0.7	Jiri Wald	Sun, 4 Aug 2019 10:45:48 +0100	47 lines
Re: 3D classification RELION 3.0.7	Takanori Nakane	Sun, 4 Aug 2019 13:32:50 +0100	57 lines
Postdoc position at IBS, Grenoble, France	Carlo Petosa	Mon, 5 Aug 2019 11:43:13 +0000	212 lines
Re: Postdoctoral Position at NNF-CPR University of Copenhagen	Guillermo Montoya	Mon, 5 Aug 2019 11:47:44 +0000	288 lines
Inquiry into Relion and CisTEM workshops	Cody Brazel	Mon, 5 Aug 2019 17:22:22 +0100	32 lines
Real Space Refinement with Map Symmetry	Stephan Tetter	Tue, 6 Aug 2019 13:09:51 +0100	29 lines
IST Austria cryo-EM inauguration symposium, October 18	Carrie Bernecky	Tue, 6 Aug 2019 23:25:18 +0200	51 lines
How to add noise to reprojections?	Eric Verbeke	Tue, 6 Aug 2019 23:49:46 +0100	33 lines
Open positions - NeCEN	Renault, L.L.R. (Ludo)	Wed, 7 Aug 2019 09:14:49 +0000	164 lines
cryo-ET postdoc position at the National University of Singapore	Lu Gan	Wed, 7 Aug 2019 18:08:18 +0800	365 lines
TIME TO REGISTER: 33rd Rhine Knee Meeting Structural Biology - October 2019 - Lausanne (Switzerland)	Pojer Florence	Wed, 7 Aug 2019 13:16:50 +0000	363 lines
Re: Real Space Refinement with Map Symmetry	Paul Emsley	Wed, 7 Aug 2019 14:30:47 +0100	39 lines
Training of relion3 polishing gets stuck	Julian Reitz	Wed, 7 Aug 2019 16:10:00 +0100	33 lines
Re: Training of relion3 polishing gets stuck	Takanori Nakane	Wed, 7 Aug 2019 16:46:26 +0100	52 lines
Dipping in FSC	Yangqi Gu	Wed, 7 Aug 2019 16:56:28 +0100	32 lines
Re: Dipping in FSC	Takanori Nakane	Wed, 7 Aug 2019 17:05:43 +0100	52 lines
Re: Training of relion3 polishing gets stuck	Julian Reitz	Wed, 7 Aug 2019 18:08:40 +0200	98 lines
Re: Training of relion3 polishing gets stuck	Takanori Nakane	Wed, 7 Aug 2019 17:37:49 +0100	113 lines
Re: Dipping in FSC	BuddySphinx	Wed, 7 Aug 2019 12:47:29 -0400	808 lines
Re: Motioncorr error in Relion3	Qiuye Li	Wed, 7 Aug 2019 19:53:05 +0100	42 lines
Re: Motioncorr error in Relion3	Takanori Nakane	Wed, 7 Aug 2019 21:03:55 +0100	61 lines
Re: Motioncorr error in Relion3	Qiuye Li	Wed, 7 Aug 2019 16:14:31 -0400	148 lines
Re: upfitting a workstation	Thejusvi Ganesh	Wed, 7 Aug 2019 14:06:45 -0700	227 lines
lower resolution after postprocessing	Da Cui	Thu, 8 Aug 2019 04:35:04 +0100	27 lines
Re: lower resolution after postprocessing	Takanori Nakane	Thu, 8 Aug 2019 06:07:45 +0100	41 lines
Re: Dipping in FSC	Takanori Nakane	Thu, 8 Aug 2019 10:44:02 +0100	83 lines
The new embedded K3 in EPU gain reference file	Yehuda Halfon	Thu, 8 Aug 2019 11:43:04 +0000	93 lines
Re: The new embedded K3 in EPU gain reference file	Takanori Nakane	Thu, 8 Aug 2019 12:51:43 +0100	60 lines
Re: The new embedded K3 in EPU gain reference file	Yehuda Halfon	Thu, 8 Aug 2019 11:58:57 +0000	327 lines
Re: The new embedded K3 in EPU gain reference file	Takanori Nakane	Thu, 8 Aug 2019 13:05:00 +0100	152 lines
Re: The new embedded K3 in EPU gain reference file	Yehuda Halfon	Thu, 8 Aug 2019 12:08:42 +0000	396 lines
Re: The new embedded K3 in EPU gain reference file	Wim Hagen	Thu, 8 Aug 2019 14:25:11 +0200	178 lines
Re: The new embedded K3 in EPU gain reference file	Takanori Nakane	Thu, 8 Aug 2019 13:53:45 +0100	145 lines
Re: The new embedded K3 in EPU gain reference file	Wim Hagen	Thu, 8 Aug 2019 15:18:56 +0200	51 lines
Re: How to add noise to reprojections?	David Michael Belnap	Thu, 8 Aug 2019 16:08:36 +0000	39 lines
Re: How to add noise to reprojections?	Ludtke, Steven J.	Thu, 8 Aug 2019 17:52:25 +0000	245 lines
First Announcement: EMBO Practical Course CEM3DIP 2020: Single particle cryoEM of macromolecular-assemblies and cellular tomography	Ramanathan Natesh	Thu, 8 Aug 2019 18:07:48 +0000	458 lines
Subtomogram averaging and resolution	Reza Khayat	Thu, 8 Aug 2019 22:24:08 +0000	83 lines
Re: Subtomogram averaging and resolution	Huy Bui	Thu, 8 Aug 2019 23:35:21 -0600	108 lines
Re: Subtomogram averaging and resolution	Bruno KLAHOLZ	Fri, 9 Aug 2019 05:54:53 +0000	271 lines
Re: Subtomogram averaging and resolution	Lars-Anders Carlson	Fri, 9 Aug 2019 12:23:45 +0200	88 lines
confusion about MTF data	Sara L Campbell	Fri, 9 Aug 2019 15:29:57 -0700	76 lines
Re: confusion about MTF data	Daniel Asarnow	Fri, 9 Aug 2019 17:11:29 -0700	7271 lines
Re: confusion about MTF data	Daniel Asarnow	Fri, 9 Aug 2019 17:27:37 -0700	137 lines
Re: confusion about MTF data	Sara L Campbell	Fri, 9 Aug 2019 20:30:25 -0700	1230 lines
Re: 1U GPU server recommendations?	Lu Gan	Sat, 10 Aug 2019 22:56:02 +0800	345 lines
Re: The new embedded K3 in EPU gain reference file	Yehuda Halfon	Sun, 11 Aug 2019 08:17:17 +0000	217 lines
Re: The new embedded K3 in EPU gain reference file	Takanori Nakane	Sun, 11 Aug 2019 09:19:45 +0100	103 lines
Re: The new embedded K3 in EPU gain reference file	Yehuda Halfon	Sun, 11 Aug 2019 08:24:49 +0000	282 lines
Re: The new embedded K3 in EPU gain reference file	Takanori Nakane	Sun, 11 Aug 2019 09:30:05 +0100	131 lines
Re: confusion about MTF data	Gabriel Lander	Sun, 11 Aug 2019 22:55:33 -0700	257 lines
Re: confusion about MTF data	Matthew Belousoff	Mon, 12 Aug 2019 17:44:07 +1000	112 lines
Re: confusion about MTF data	Takanori Nakane	Mon, 12 Aug 2019 08:53:44 +0100	86 lines
Re: confusion about MTF data	Sara L Campbell	Mon, 12 Aug 2019 09:03:27 -0700	248 lines
Re: confusion about MTF data	Takanori Nakane	Mon, 12 Aug 2019 17:25:58 +0100	181 lines
Postdoc Position in Cryo-EM at The Pennsylvania State University College of Medicine	Kenneth Lee	Mon, 12 Aug 2019 20:44:13 +0100	60 lines
Map resolution range	Sangho Park	Mon, 12 Aug 2019 21:48:22 +0100	24 lines
Faculty position at Uppsala University	Daniel Larsson	Tue, 13 Aug 2019 08:38:31 +0000	194 lines
postdoc position in cryo-EM of membrane protein complexes at PSI / ETH	Vladimir Korkhov	Tue, 13 Aug 2019 12:17:04 +0100	65 lines
Question about RELION polishing	Li, Zhuang	Tue, 13 Aug 2019 13:57:27 +0000	98 lines
Re: Question about RELION polishing	Takanori Nakane	Tue, 13 Aug 2019 15:17:33 +0100	46 lines
Postdoc: in situ cryo-ET with long-term funding in Munich	Ben Engel	Tue, 13 Aug 2019 17:17:49 +0200	146 lines
MicroED Workshop 2019	Johan Hattne	Tue, 13 Aug 2019 13:43:58 -0700	47 lines
Lectures from CCP-EM Spring Symposium	Tom Burnley - UKRI STFC	Wed, 14 Aug 2019 10:29:08 +0000	66 lines
PhD position - Structural Biology Methods development at Würzburg University	Andrea Thorn	Wed, 14 Aug 2019 15:46:58 +0200	52 lines
relion autopicking crash	Maria Falzone	Wed, 14 Aug 2019 15:19:17 +0100	63 lines
Postdoctoral opportunity (Cambridge, UK)	Yorgo Modis	Wed, 14 Aug 2019 15:31:17 +0100	40 lines
Re: relion autopicking crash	Takanori Nakane	Wed, 14 Aug 2019 15:34:02 +0100	102 lines
empty final reconstruction after auto-refinement	Krupp, Paul Ferdinand	Thu, 15 Aug 2019 07:53:59 +0000	285 lines
Re: empty final reconstruction after auto-refinement	Takanori Nakane	Thu, 15 Aug 2019 10:11:13 +0100	151 lines
AW: [ext] Re: [ccpem] empty final reconstruction after auto-refinement	Krupp, Paul Ferdinand	Thu, 15 Aug 2019 10:08:55 +0000	11762 lines
Re: AW: [ext] Re: [ccpem] empty final reconstruction after auto-refinement	Takanori Nakane	Thu, 15 Aug 2019 12:10:41 +0100	218 lines
Queries re relion_it.py - pause and wait for user input?	Oliver Clarke	Thu, 15 Aug 2019 15:59:10 +0000	66 lines
Re: Queries re relion_it.py - pause and wait for user input?	Takanori Nakane	Thu, 15 Aug 2019 17:02:06 +0100	55 lines
Postdoctoral Position in CryoEM/CryoET of Host-Pathogen Interactions at Columbia University	Ho, Chi-Min	Thu, 15 Aug 2019 16:15:27 +0000	242 lines
Postdoc position at Imperial College London	Ali, Maruf	Fri, 16 Aug 2019 10:54:13 +0000	151 lines
CryoEM Senior Software Scientist in eBIC, Diamond Light Source, UK	<>	Fri, 16 Aug 2019 21:40:35 +0100	204 lines
Particle Sorting in Relion 3.0.5	Cody Brazel	Mon, 19 Aug 2019 16:05:37 +0100	35 lines
Re: Particle Sorting in Relion 3.0.5	Bruno KLAHOLZ	Mon, 19 Aug 2019 15:17:38 +0000	41 lines
Relion 3D auto-refine	Sangho Park	Mon, 19 Aug 2019 16:28:58 +0100	26 lines
Re: Relion 3D auto-refine	haaris safdari	Mon, 19 Aug 2019 21:03:11 +0530	73 lines
Re: Particle Sorting in Relion 3.0.5	Cody Brazel	Mon, 19 Aug 2019 16:39:08 +0100	28 lines
Re: Relion 3D auto-refine	Takanori Nakane	Mon, 19 Aug 2019 17:48:13 +0100	53 lines
Relion 3: CTF Estimation is not finding the mrc files	Narashima Kumar	Mon, 19 Aug 2019 09:58:03 -0700	125 lines
Staff scientist of Structural biology at St Jude	Ji Sun	Mon, 19 Aug 2019 19:46:24 +0100	45 lines
Re: Relion 3: CTF Estimation is not finding the mrc files	Takanori Nakane	Mon, 19 Aug 2019 21:05:43 +0100	71 lines
Re: Relion 3: CTF Estimation is not finding the mrc files	Narashima Kumar	Mon, 19 Aug 2019 20:32:03 -0700	336 lines
Re: Relion 3: CTF Estimation is not finding the mrc files	Craig Yoshioka	Tue, 20 Aug 2019 03:40:46 +0000	318 lines
Re: Relion 3: CTF Estimation is not finding the mrc files	Schenk, Andreas Daniel	Tue, 20 Aug 2019 08:08:00 +0000	1112 lines
Cryo-EM school 2019 - NeCEN, Leiden	Renault, L.L.R. (Ludo)	Tue, 20 Aug 2019 08:16:13 +0000	137 lines
Postdoc position in membrane protein structural biology	Ashley Pike	Tue, 20 Aug 2019 13:18:46 +0000	161 lines
Re: Relion 3: CTF Estimation is not finding the mrc files	Narashima Kumar	Tue, 20 Aug 2019 07:24:36 -0700	670 lines
Gautomatch and K3	Leonid Sazanov	Tue, 20 Aug 2019 16:12:20 +0100	33 lines
need someone officially settle a pdb related dispute	Flemming Goery	Tue, 20 Aug 2019 15:40:28 +0000	112 lines
Re: Using SAXS derived density maps to aid in Relion single particle processing	Carlos Oscar S. Sorzano	Tue, 20 Aug 2019 18:59:03 +0100	63 lines
Using SAXS derived density maps to aid in Relion single particle processing	Cody Brazel	Tue, 20 Aug 2019 19:18:37 +0100	35 lines
Re: [3dem] Objective Astigmatism Stability	Marin van Heel	Tue, 20 Aug 2019 19:00:41 -0300	107 lines
Electron microscopy position at UCB Slough	Joedicke Lisa	Wed, 21 Aug 2019 14:39:40 +0000	327 lines
Storage conditions for the negative staining solutions	Dmitry Semchonok	Wed, 21 Aug 2019 17:04:35 +0200	210 lines
Merging K2 and Falcon III datasets	Noor Agip	Wed, 21 Aug 2019 17:03:31 +0100	25 lines
Re: Merging K2 and Falcon III datasets	Takanori Nakane	Wed, 21 Aug 2019 17:08:54 +0100	48 lines
Re: Merging K2 and Falcon III datasets	Noor Agip	Wed, 21 Aug 2019 17:33:54 +0100	62 lines
Storage conditions for the negative staining solutions	Reinhard Rachel	Wed, 21 Aug 2019 21:28:25 +0200	48 lines
Re: Merging K2 and Falcon III datasets	Y. Mutum	Thu, 22 Aug 2019 12:15:47 +0000	203 lines
Second Announcement: EMBO Practical Course CEM3DIP 2020: Single particle cryoEM of macromolecular-assemblies and cellular tomography	Ramanathan Natesh	Thu, 22 Aug 2019 16:38:19 +0000	514 lines
Faculty position @ U of Chicago	Phoebe A. Rice	Thu, 22 Aug 2019 16:51:30 +0000	2226 lines
Postdoctoral Positions in Structural RNA Biology at the NIH	Eugene Valkov	Thu, 22 Aug 2019 13:29:37 -0400	324 lines
ERROR: Number of MPI processes must be an odd number for 3D auto-refine	Dong-Hua Chen	Thu, 22 Aug 2019 12:29:31 -0700	119 lines
Re: ERROR: Number of MPI processes must be an odd number for 3D auto-refine	Takanori Nakane	Thu, 22 Aug 2019 20:37:25 +0100	96 lines
Re: ERROR: Number of MPI processes must be an odd number for 3D auto-refine	Takanori Nakane	Thu, 22 Aug 2019 20:40:30 +0100	97 lines
Re: ERROR: Number of MPI processes must be an odd number for 3D auto-refine	Dong-Hua Chen	Thu, 22 Aug 2019 12:45:29 -0700	230 lines
on learning relion	Flemming Goery	Fri, 23 Aug 2019 01:44:28 +0000	23 lines
Backprojector::set1DFourierTransform%%ERROR: Dimension of the data array should be 2	Francesca Magnani	Fri, 23 Aug 2019 10:21:56 +0100	27 lines
Re: on learning relion	Joshua Lobo	Fri, 23 Aug 2019 10:46:04 +0100	89 lines
Re: Backprojector::set1DFourierTransform%%ERROR: Dimension of the data array should be 2	Takanori Nakane	Fri, 23 Aug 2019 10:47:31 +0100	45 lines
Re: Backprojector::set1DFourierTransform%%ERROR: Dimension of the data array should be 2	Joshua Lobo	Fri, 23 Aug 2019 10:48:45 +0100	95 lines
Re: Backprojector::set1DFourierTransform%%ERROR: Dimension of the data array should be 2	Francesca Magnani	Fri, 23 Aug 2019 11:14:41 +0100	36 lines
Re: Backprojector::set1DFourierTransform%%ERROR: Dimension of the data array should be 2	Takanori Nakane	Fri, 23 Aug 2019 12:03:19 +0100	57 lines
Re: on learning relion	Takanori Nakane	Fri, 23 Aug 2019 12:28:03 +0100	84 lines
Relion3 Manual Pick error	James Conway	Sat, 24 Aug 2019 16:31:38 +0100	54 lines
Re: Relion3 Manual Pick error	Takanori Nakane	Sat, 24 Aug 2019 17:00:08 +0100	67 lines
Re: Relion3 Manual Pick error	Takanori Nakane	Sat, 24 Aug 2019 17:20:39 +0100	103 lines
Re: Backprojector::set1DFourierTransform%%ERROR: Dimension of the data array should be 2	Francesca Magnani	Mon, 26 Aug 2019 16:37:29 +0100	21 lines
Student/postdoc fellowships for Understanding Biology through Structure, March 16-20, 2020	Tom Terwilliger	Tue, 27 Aug 2019 10:30:37 -0600	120 lines
relion InitialModel question	jp d	Tue, 27 Aug 2019 21:00:27 +0000	54 lines
Re: relion InitialModel question	Krieger, James M	Tue, 27 Aug 2019 21:12:21 +0000	180 lines
auto-refine converges quickly at low resolution	Qiuye Li	Wed, 28 Aug 2019 04:33:45 +0100	49 lines
U-M faculty search in cryo-ET and CLEM	Michael Cianfrocco	Wed, 28 Aug 2019 09:22:55 -0400	148 lines
cryo EM Lab Head position, Melbourne, Australia	Onisha Patel	Thu, 29 Aug 2019 00:01:48 +0000	4320 lines
Image-processing strategies for small membrane proteins	Oosterheert, W. (Wout)	Thu, 29 Aug 2019 12:59:00 +0000	233 lines
Refinement with pseudo-symmetry	Ashu Sharma	Thu, 29 Aug 2019 14:07:30 -0400	49 lines
Re: Refinement with pseudo-symmetry	Daniel Asarnow	Thu, 29 Aug 2019 11:23:05 -0700	85 lines
Error during motion correction job in Relion	Nandish Kumar Khanra	Fri, 30 Aug 2019 04:16:41 +0000	116 lines
Postdoc position in cryo-EM of membrane proteins at St. Jude	Chia-Hsueh Lee	Fri, 30 Aug 2019 05:23:01 +0100	96 lines
Re: Error during motion correction job in Relion	Takanori Nakane	Fri, 30 Aug 2019 05:40:37 +0100	61 lines
Re: Image-processing strategies for small membrane proteins	Carlos Oscar S. Sorzano	Fri, 30 Aug 2019 06:55:51 +0200	384 lines
Re: Image-processing strategies for small membrane proteins	Sjors Scheres	Fri, 30 Aug 2019 09:28:32 +0100	138 lines
Re: Image-processing strategies for small membrane proteins	Thomas Bausewein	Fri, 30 Aug 2019 11:07:50 +0200	204 lines
Fully funded PhD position at the University of Regensburg	Dina Grohmann	Fri, 30 Aug 2019 13:19:50 +0200	5473 lines
Workshop: An Introduction to MicroED, 6-8 Nov 2019. Registration now open	[log in to unmask]	Fri, 30 Aug 2019 14:59:19 +0000	206 lines
Re: Workshop: An Introduction to MicroED, 6-8 Nov 2019. Registration now open	Hongyi Xu	Fri, 30 Aug 2019 15:02:09 +0000	311 lines
Workshop: An Introduction to MicroED, 6-8 Nov 2019. Registration now open	[log in to unmask]	Fri, 30 Aug 2019 18:31:47 +0000	215 lines
Post-doctoral research position in membrane protein structural biology	Hasan, Syed Saif	Fri, 30 Aug 2019 19:19:30 +0000	243 lines
Re: Error during motion correction job in Relion	Nandish Kumar Khanra	Sat, 31 Aug 2019 00:08:01 +0000	215 lines
Re: Error during motion correction job in Relion	Takanori Nakane	Sat, 31 Aug 2019 05:36:56 +0100	112 lines

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August 2019

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