Hi,
> Also, is 3.0.6 the latest version? I couldn’t find the version info on Gith
> ub.
The latest version is 3.0.7.
https://github.com/3dem/relion/releases
This fixed "an MPI-related bug where refinement and classification
stall at the beginning or at a certain iteration", which seems relevant to
your case. Could you please try this version?
Best regards,
Takanori Nakane
> ?On 7/17/19, 9:22 AM, "Takanori Nakane" <[log in to unmask]>
> wrote:
> Hi,
> > We recently transitioned to Relion 3.0.6.
> Do you mean the problem was not present in earlier versions?
> If so, which version?
> > Relion_refine stops running, but the job still shows as active in
> the GUI.
> Do you mean the process (relion_refine_mpi) is killed?
> Doesn't 'dmesg' say something like segmentation fault?
> > In addition, when continuing a 3D classification job with fast
> subsets
> selected,
> > an error is given saying fast subsets isn’t a valid argument and the
> job quits
> This is a harmless warning (will be fixed in 3.1).
> If the job quits, it is caused by something else.
> Best regards,
> Takanori Nakane
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