Dear all,
I started the first run (i.e. training) of Bayesian Polishing
(relion-3.1-beta) on 10,000 particles (450 x 450), 3600 micrographs on a
machine with 8 CPUs, 128 GB RAM about 10 hours ago and it is still
running. Sadly, there is no progress indicator as in other relion tasks.
How long such a run will be? How does it scale? I had 5,000 particles
previously and it finished after about 4 hours; output is currently
showing "micrograph 482/482: 27 particles [10005 total]". Apart from
some disk access by another program from another machine via sshfs,
there is nothing going on on this work station!
Thanks for hints, bw Dieter
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Dieter Blaas,
Max F. Perutz Laboratories
Medical University of Vienna,
Inst. Med. Biochem., Vienna Biocenter (VBC),
Dr. Bohr Gasse 9/3,
A-1030 Vienna, Austria,
Tel: 0043 1 4277 61630,
Fax: 0043 1 4277 9616,
e-mail: [log in to unmask]
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