HI CCEPM
I have a question about the outlier_removal_zscore parameter in relion_autopick. I am trying to get the auto-picker to stay away from obvious non-particles with very high contrast. The default is 8 which I assume should be plenty to stay away from these non-particles(since it is 8 sigmas away) . My auto picking threshold is 0.9 and the Maximum standard deviation is 1.2 . Am I not thinking about/ using this zscore value in the right way?
Thanks
Sincerely
Joshua Lobo
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