Dear FSL List,
In analyzing our fMRI data set, I noticed that the TE time listed in the first-level design file generated by FSL does not match the TE time in the higher-level design file, and, that neither TE's match the actual TE parameters (as per the dicom header). We don't use B0 unwarping so the GUI never prompts for TE. How/why does the TE end up in the design file and does it matter if it is incorrect if we do not use unwarping?
Thanks very much,
Yelena G Bodien, PhD
Research Scientist, Laboratory for Neuroimaging in Coma and Consciousness (NICC)
Center for Neurotechnology and Neurorecovery (CNTR)
Instructor, Department of Neurology, Harvard Medical School
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