Hi,
I am new to FSL so I may have naive questions. But I would greatly appreciate your reply.
I am working on an imaging database including T1 and DTI data. For my study, I downloaded probabilistic maps of my region of interest and would like to apply these to the structural T1 images then to DTI.
I did the following:
I used invwarp to calculate non-linear standard to struct. transform.
Then I used applywarp argument: applywarp -i (prob-map) -r (structural image) -w warped files -interp nn
At this point i am very confused.
My general aim is to apply the probabilistic maps to the structural T1 images then convert/transform them to the functional image which is the DTI image.
how should I proceed? Do I need to re-do things differently?
Thanks a lot and I look forward to your soonest reply.
Best Regards,
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