Hello,
I normally run probtrackx with the classification targets option to get seed_to_mask outputs where I can extract the mean and volume with fslstats to assess connectivity strength between the seed and and different targets. I am curious to know, if I take the whole brain fdt_paths output and use the target masks to extract the stats from only the specified target mask regions, would that connectivity information be legitimate for assessing connectivity strength between the seed and different targets?
Thanks,
Zhong
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