Hello Matthias,
Can you confirm which version of FSL you are using?
Kind Regards
Matthew
> Thanks for your answer Steve. I can open up the Niftis with FSLview and see every volume. Maybe the conversion via dcm2nii brought some errors. How do I check if it is really corrupt? I will try it with another converter.
>
> Matthias
>
> On 17 Dec 2013, at 10:20:38, Stephen Smith wrote:
>
>> Hi -= you can see from your log (the first part of “Initialisation”) that even your 4D fmri input data > is problematic - either the file is corrupt or unreadable I guess?
>>
>> Steve.
>>
>> On 17 Dec 2013, at 01:28, Matthias Heil wrote:
>>
>> > [...]
>> > I have enough disk space, swap (22GB) and ram (4GB). I also tried the > analysis with a smaller nifti (only the first 100 dicoms) -> same errors.
>> >
>> > [...]
>> > I don't know if its important: I'm working on multiband images (factor 6 in
>> > this case). Melodic did work fine before on other data. It's also the > first case
>> > in which I use the BBR, no resampling and Nonlinear Registration/fnirt, and 2
>> > resting state sessions of the same person (so same structural/T1 image; I did
>> > choose multi-session temporal concatenation). Brain-extracted and
>> > non-brain-extracted do exist with the right name. At the moment I'm only
>> > working with the GUI.
>> >
>> > Thanks from Dresden at night with no snow,
>> > Matthias
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