Hi Sjors,
I get a strange error after iteration 13:
Last message in the X.out file:
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Auto-refine: Estimated accuracy angles= 4.015 degrees; offsets= 1.784
pixels
Auto-refine: Angular step= 1.875 degrees; local searches= true
Auto-refine: Offset search range= 4.014 pixels; offset step= 1.338
pixels
Estimated required memory for expectation step= 0.128886 Gb, maximum
allowed memory = 4 Gb.
CurrentResolution= 32.4 Angstroms, which requires orientationSampling
of at least 11.25 degrees for a particle of diameter 330 Angstroms
Oversampling= 0 NrHiddenVariableSamplingPoints= 2654208
OrientationalSampling= 3.75 NrOrientations= 145
TranslationalSampling= 2.676 NrTranslations= 9
=============================
Oversampling= 1 NrHiddenVariableSamplingPoints= 84934656
OrientationalSampling= 1.875 NrOrientations= 1160
TranslationalSampling= 1.338 NrTranslations= 36
=============================
Message in the X.err file:
/relion-1.2_intel/bin/relion_refine_mpi: symbol lookup error:
/home/lv70172/blaas/software/relion-1.2_intel/bin/relion_refine_mpi:
undefined symbol: __libm_error_support
/relion-1.2_intel/bin/relion_refine_mpi: symbol lookup error:
/home/lv70172/blaas/software/relion-1.2_intel/bin/relion_refine_mpi:
undefined symbol: __libm_error_support
/relion-1.2_intel/bin/relion_refine_mpi: symbol lookup error:
/home/lv70172/blaas/software/relion-1.2_intel/bin/relion_refine_mpi:
undefined symbol: __libm_error_support
and so on till the crash.....
Any ideas? Thanks, Dieter
--
Dr. Dieter Blaas
Max F. Perutz Laboratories,
Inst. Med. Biochem.,
Med. Univ. Vienna
Dr. Bohr Gasse 9/3
A-1030 Vienna, Austria
Tel. 0043 1 4277 61630
Fax 0043 1 4277 9616
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