Hello,
I'm using FSL 5.0.2 and trying to get coordinates using the cluster command. However, I seem to be getting the same result regardless of whether I am using --mm or not. My maps are in standard 1mm space. Does anyone know what I might be doing wrong? Thanks in advance!!
Best,
Jake
1. cluster -i 5v5_Right-Pallidum_tstat3.nii.gz -t 3.355
Cluster Index Voxels MAX MAX X (vox) MAX Y (vox) MAX Z (vox) COG X (vox) COG Y (vox) COG Z (vox)
3 43 5.98 81 122 61 82.2 121 60.8
2 5 4.05 87 109 72 86.6 110 72
1 3 3.85 79 126 62 79.3 126 62.3
2. cluster -i 5v5_Right-Pallidum_tstat3.nii.gz -t 3.355 --mm
Cluster Index Voxels MAX MAX X (mm) MAX Y (mm) MAX Z (mm) COG X (mm) COG Y (mm) COG Z (mm)
3 43 5.98 81 122 61 82.2 121 60.8
2 5 4.05 87 109 72 86.6 110 72
1 3 3.85 79 126 62 79.3 126 62.3
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