-----BEGIN PGP SIGNED MESSAGE-----
Hash: SHA1
Dear Wei,
you could use coot "Calculate->Model/Fit/Refine->Simple Mutate" also for
nucleic acids.
It may be worth running geometry idealisation in coot or refmac5 before
using the model in MR.
Tim
On 11/19/2011 09:44 PM, Wei Shi wrote:
> Hi all,
> I want to change a piece of DNA in pdb file to match the target DNA
> sequence in order to be used as a search model in molecular replacement.
> Does anyone happen to know how I could do this? Thank you so much!
>
> Best,
> Wei
>
- --
- --
Dr Tim Gruene
Institut fuer anorganische Chemie
Tammannstr. 4
D-37077 Goettingen
GPG Key ID = A46BEE1A
-----BEGIN PGP SIGNATURE-----
Version: GnuPG v1.4.10 (GNU/Linux)
Comment: Using GnuPG with Mozilla - http://enigmail.mozdev.org/
iD8DBQFOyjTzUxlJ7aRr7hoRApYSAJ4xf8R1kjy+sl16WlQRGuOZuW4kbQCbBwB7
hY5x91qUynn4xFxrYHsN/kY=
=HaRr
-----END PGP SIGNATURE-----
|