Dear tbss users,
When running the tbss_non_FA script (FSL 4.1.6) on my L1 data, I get the following error:
“using pre-chosen registration target: target
upsampling alternative images into standard space
all
** ERROR (nifti_image_read): failed to find header file for '../L1/all'
** ERROR: nifti_image_open(../L1/all): bad header info
Error: failed to open file ../L1/all
ERROR: Could not open image ../L1/all
Image Exception : #22 :: Failed to read volume ../L1/all
terminate called after throwing an instance of 'RBD_COMMON::BaseException'
Aborted
mean
** ERROR (nifti_image_read): failed to find header file for '../L1/mean'
** ERROR: nifti_image_open(../L1/mean): bad header info
Error: failed to open file ../L1/mean
ERROR: Could not open image ../L1/mean
Image Exception : #22 :: Failed to read volume ../L1/mean
terminate called after throwing an instance of 'RBD_COMMON::BaseException'"
Nevertheless, the script creates the ‘to_target_L1.nii.gz’ images in the FA folder and then it gives a new error:
"merging all upsampled L1 images into single 4D image
terminate called after throwing an instance of 'std::bad_alloc'
what(): std::bad_alloc
Aborted"
Any suggestions on how to fix this problem would be greatly appreciated.
Kind regards,
Annouchka
Motor Control Laboratory
Department of Biomedical Kinesiology
K.U.Leuven
Tervuursevest 101
3001 Heverlee, Belgium
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