Hi Dinesh,
Bedpostx periodically looks into the output directory to see which
slice is being processed. So if slice zero appears many times, it just
means that it is still being processed (or that slice 1 i still being
processed).
Cheers,
Saad.
On 20 Apr 2009, at 06:13, Dinesh Shukla wrote:
> Dear FSL experts,
>
> When I run "bedpostx", it continuous says, "0 slices processed" and
> when I look into the "{sub}.bedpostX", think all necessary files are
> created. Can someone please tell me what might be going on...
> The machine is a Mac version 10.5.6 Dual-Core Intel Xeon
>
> Following is what I see when I start "BEDPOSTX" from FSL gui"
>
> [Macintosh:/Dinesh/BedpostX] Lab% fsl
> switching from /Dinesh/BedpostX to /Dinesh/BedpostX
> bedpostx /Dinesh/BedpostX/a43 -n 2 -w 1 -b 1000
> /usr/local/fsl/bin/bedpostx /Dinesh/BedpostX/a43 -n 2 -w 1 -b 1000
> subjectdir is /Dinesh/BedpostX/a43
> Making bedpostx directory structure
> Queuing preprocessing stages
> Queuing parallel processing stage
> 0 slices processed
> 0 slices processed
> 0 slices processed
> ....
>
>
Saad Jbabdi
Oxford University FMRIB Centre
JR Hospital, Headington, OX3 9DU, UK
+44 (0) 1865 222545 (fax 717)
www.fmrib.ox.ac.uk/~saad
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