Also take a look at the command line options. You can specify a lut for each image on the command line with the -l flag.
------Original Message------
From: Matt Glasser
Sender: FSL - FMRIB's Software Library
To: [log in to unmask]
ReplyTo: FSL - FMRIB's Software Library
Sent: 20 Dec 2008 22:52
Subject: Re: [FSL] FSLVIEW checks name (?)
I don't know that you can avoid the check, however you can change the
aux_file = '' flag to any one of the default FSLView lookup tables (e.g.
'Red-Yellow').
Peace,
Matt.
-----Original Message-----
From: FSL - FMRIB's Software Library [mailto:[log in to unmask]] On Behalf
Of Wim Otte
Sent: Saturday, December 20, 2008 3:55 AM
To: [log in to unmask]
Subject: [FSL] FSLVIEW checks name (?)
Hi,
I just figured out that Fslview checks the name of a file.
When the name contains 'stat' the lookup-table is changed from grayscale
to red-yellow.
1. Is there a way to avoid this check (instead of renaming files like
'restingstate.nii.gz to something else)?
2. Is it possible to specify another the lookup table by setting a certain
flag? (e.g. dime.unused1, dime.funused1, dime.funused2) as determined with
dbedit (http://imaging.mrc-cbu.cam.ac.uk/imaging/DBedit).
Thank you,
Sincerely,
Wim Otte
--
PhD student
Image Sciences Institute
UMC Utrecht
Bolognalaan 50
3584 CJ Utrecht
The Netherlands
email: [log in to unmask]
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