Hi,
Minor inaccuracies in BET don't generally make any difference to the
FLIRT result.
Cheers.
On 17 Jul 2008, at 10:27, Vina Goghari wrote:
> Hello all,
> I'm using BET to strip the brains of MP-RAGE images. I don't get a
> good strip with the default settings, so I've been entering brain
> center coordinates myself as well as using some of the other
> functions offered. My question is that I usually end up getting a
> very reasonable strip, but there is a little bit of extraneous
> material left near the brain stem, that I cannot seem to get rid
> off. I've run the data through and the registrations look reasonable
> at single session. My question is will this cause problems at
> subject or group level registrations? And also are there tools one
> could use to just quickly cut that extraneous material out?
>
> Thanks,
> Vina
>
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Stephen M. Smith, Professor of Biomedical Engineering
Associate Director, Oxford University FMRIB Centre
FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
+44 (0) 1865 222726 (fax 222717)
[log in to unmask] http://www.fmrib.ox.ac.uk/~steve
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