Hi all,
I'm using MRIConvert to convert dicom files to nifti format - after doing
so, I check the orientation with avworient and the images are stored
neurologically. When I try to swap the orientation (avworient -swaporient
IMAGE) then check again, it says that they're still stored neurologically.
When I view the images in fslview, the "swapped" is exactly the same as the
original. If I look at the header, the only difference that I see is that
the description is changed (from the original description of my series) to
FSL3.2beta - this itself is confusing, since I have FSL3.3 installed... Any
thoughts on what I might be doing wrong?
Thanks in advance,
Pat
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