Hi,
for an fMRI series which does not cover the whole brain (e. g. 20 slices 4 mm
thick), how is spatial normalisation best achieved?
Can object masking (be recommended, e. g. a binary mask of the volume) to keep
the influence of the missing parts and the border zones low ?
Should the starting position be optimized manually (SPM2)?
(Coregistering on T1 did not work properly using MI, otherwise we would have
used this option)
Grateful for any hints on this,
Philipp
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