Dear list,
I apologize in advance for this very basic question.
In Matlab (7.14, patched) I am unable to open FSL files with read_avw('file.nii.gz') running the Mac OSX Yosemite.
I have run the edited startup.m file, using the syntax as posted (http://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallation/MacOsX#FslInstallation.2BAC8-FslInstaller.Running_the_installer_.28on_Mac_or_Linux.29)
-> the startup.m file is located in the default folder created by the Matlab installer which is in the Documents directory: /users/lancestevens/documents/Matlab
-> the actual Matlab application is in /applications
-the error message is "Error using read_avw(line 27) Cannot open volume all_FA_skeletonised for reading!
-> I have tried opening other images and the same error is returned.
-in the terminal, echo $FSLDIR returns the correct FSL location of /usr/local/fsl
Any assistance would be much appreciated,
Lance
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