Hi,
I've tried running your command on the FEAT directory you
uploaded and tsplot completes successfully - if you have access to a
different platform it might be worth rerunning your command on that to
make sure this isn't an issue with your system...
Many Regards
Matthew
> Dear Steve Smith,
>
> there is no error-message or waring in the according log-file, so I
> guess the analyses are ok.
>
> I do have writing permissions, so I uploaded the feat-directory
> (upload ID: 358687).
>
> Thank you very much for your help!
> -Lucas
>
>
>
> On 19.04.2009, at 02:58, Steve Smith wrote:
>
>> Hi - I'm not sure - this should work ok - did the original FEAT run
>> finish ok, and do you have write permission in this directory?
>> If you haven't resolved this yet then feel free to upload the
>> entire FEAT directory for us to have a quick look.
>>
>> Please upload the files in a single compressed tarfile to
>> http://www.fmrib.ox.ac.uk/cgi-bin/upload.cgi
>> And then email me the upload ID.
>>
>> Cheers, Steve.
>>
>>
>> On 18 Apr 2009, at 00:28, Lucas Eggert wrote:
>>
>>> Dear Experts,
>>>
>>> I am trying to use tsplot to get time series information for
>>> different
>>> cluster-masks.
>>>
>>> But already when I am trying to simply rerun tsplot, I am getting a
>>> segmentation fault:
>>>
>>> ************** Terminal output *************************
>>>
>>> lucas@pc-15-302-2[63]-12:24:02>: cd
>>> first_level_feat_directories/ac33_functional.feat
>>> lucas@pc-15-302-2[64]-12:24:05>: ls
>>> absbrainthresh.txt confoundevs.txt
>>> lmax_zstat1_std.txt rendered_thresh_zstat3.png
>>> cluster_mask_zstat1.nii.gz custom_timing_files
>>> lmax_zstat2.txt
>>> report.html
>>> cluster_mask_zstat2.nii.gz design.con
>>> lmax_zstat2_std.txt report_log.html
>>> cluster_mask_zstat3.nii.gz design.frf
>>> lmax_zstat3.txt
>>> report_poststats.html
>>> cluster_zstat1.html design.fsf
>>> lmax_zstat3_std.txt report_prestats.html
>>> cluster_zstat1.txt design.mat logs
>>> report_reg.html
>>> cluster_zstat1_std.html design.png
>>> mask.nii.gz
>>> report_stats.html
>>> cluster_zstat1_std.txt design.ppm mc
>>> stats
>>> cluster_zstat2.html design.trg
>>> mean_func.nii.gz
>>> thresh_zstat1.nii.gz
>>> cluster_zstat2.txt design_cov.png reg
>>> thresh_zstat1.vol
>>> cluster_zstat2_std.html design_cov.ppm
>>> reg_standard
>>> thresh_zstat2.nii.gz
>>> cluster_zstat2_std.txt example_func.nii.gz
>>> rendered_thresh_zstat1.nii.gz thresh_zstat2.vol
>>> cluster_zstat3.html featquery
>>> rendered_thresh_zstat1.png thresh_zstat3.nii.gz
>>> cluster_zstat3.txt featquery+
>>> rendered_thresh_zstat2.nii.gz thresh_zstat3.vol
>>> cluster_zstat3_std.html filtered_func_data.nii.gz
>>> rendered_thresh_zstat2.png tsplot
>>> cluster_zstat3_std.txt lmax_zstat1.txt
>>> rendered_thresh_zstat3.nii.gz
>>> lucas@pc-15-302-2[65]-12:24:06>: tsplot ./
>>> zsh: segmentation fault tsplot ./
>>> lucas@pc-15-302-2[66]-12:24:24>:
>>>
>>> ************** Terminal output *************************
>>>
>>> I am using FSL (v4.1.2) on an iMac.
>>>
>>> Thanks for any help!
>>> -Lucas
>>>
>>
>>
>> ---------------------------------------------------------------------------
>> Stephen M. Smith, Professor of Biomedical Engineering
>> Associate Director, Oxford University FMRIB Centre
>>
>> FMRIB, JR Hospital, Headington, Oxford OX3 9DU, UK
>> +44 (0) 1865 222726 (fax 222717)
>> [log in to unmask] http://www.fmrib.ox.ac.uk/~steve
>> ---------------------------------------------------------------------------
>
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