Hello everyone,
I am creating masks for doing fa mean value statistics and i have a doubt.
What is the difference between doing a mask with
fsl4.1-fslmaths /usr/share/fsl/data/atlases/JHU/JHU-ICBM-tracts-prob-1mm.nii.gz -thr 17 -uthr 17 -mas mean_FA_skeleton_mask_p-cp.nii.gz maskcs17
fsl4.1-fslmaths /usr/share/fsl/data/atlases/JHU/JHU-ICBM-tracts-prob-1mm.nii.gz -thr 17 -uthr 17 maskcs17
(without the mean_FA_skeleton_mask ) ???
and between using the
/usr/share/fsl/data/atlases/JHU/JHU-ICBM-tracts-prob-1mm.nii.gz
atlas or the
/usr/share/fsl/data/atlases/JHU/JHU-ICBM-tracts-prob-1mm.nii.gz??
thanks in advance,
Alba Garin
PhD Student
Applied Mechanics Department
Simulation Unit
Paseo Manuel Lardizabal, 15
20018 Donostia-San Sebastian. Spain
Tel. +34 943 212 800 (Ext. 2111)
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