Dear FSL experts,
I'm Yuri Nagahara. I'm conducting a research using TBSS.
I tried the non-stationarity correction option of the randomise using command line as shown below.
randomise -i all_FA_skeletonised -o tbss -m mean_FA_skeleton_mask -d design.mat -t design.con -n 10000 -C 3 --twopass
Terminal run without any error, but the name of output-file was same as the name of output-file without --twopass option as below.
tbss_clusterm_corrp_tstat1.nii.gz
tbss_clusterm_corrp_tstat2.nii.gz
Can you please tell me how can I know if --twopass option have worked successfully and what is a name of the output-file after using --twopass option?
I used FSL 4.1.9 on MacPro, Mac OS X Lion 10.7.5.
Thanks in advance.
Yuri Nagahara, M.D.
Department of Psychiatry, Graduate School of Medical Science,
Kyoto Prefectural University of Medicine,
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