Hi,
Sorry - I forgot that there was still one thing left to compile.
It seems to be that the function finite() is not being found.
I guess that in math.h on solaris 10 that this does not exist.
It is not very important for the general functioning in avwmaths++
(in fact, only -nan and -nanm use it) so the best approach is
probably to bypass it.
The easiest way is to modify the code avwmaths++.cc and
avwmaths.c by inserting the function:
int finite(double x) { return 1; }
near the beginning of the file - just before the print_usage() or
usage() functions would be good.
Once you've done this it should compile without trouble.
Let us know how you get on.
All the best,
Mark
On 27 Nov 2006, at 13:05, Christopher J Cieply wrote:
> I was having some problems with my mail account and was not sure if my
> message was sent properly. If it was sorry for the repetition but
> here
> is my query.
>
> Mark,
>
> Thanks for the for the help. It worked out almost all the errors. The
> only part that now fails is avwutils. Below is the section containing
> the error. Thanks once again for your continued help.
>
> Chris
>
>
>
>
>
> Making project src/avwutils
>
>
> c++ -Wall -ansi -pedantic -O3 -fexpensive-optimizations -
> I/home/local/fsl/extras/include/newmat -
> I/home/local/fsl/extras/include/zlib -I. -I/home/local/fsl/include -
> I/home/local/fsl/include -c -o avwmaths++.o avwmaths++.cc
>
> /usr/local/include/g++-v3/bits/stl_threads.h: In instantiation of
> `__gthread_mutex_t std::_Swap_lock_struct<0>::_S_swap_lock':
>
> /usr/local/include/g++-v3/bits/stl_threads.h:122: instantiated from
> here
>
> /usr/local/include/g++-v3/bits/stl_threads.h:115: warning:
> aggregate has
> a
>
> partly bracketed initializer
>
> avwmaths++.cc: In function `int fmrib_main(int, char**, short int)
> [with
> T =
>
> char]':
>
> avwmaths++.cc:459: instantiated from here
>
> avwmaths++.cc:359: `finite' undeclared (first use this function)
>
> avwmaths++.cc:359: (Each undeclared identifier is reported only
> once for
> each
>
> function it appears in.)
>
> make: *** [avwmaths++.o] Error 1
>
> make: Target `all' not remade because of errors.
>
>
> =========================
>
> ERROR::Could not make avwutils successfully
>
>
>
>
>
>
>
>
>
>
>
> On Tue, 2006-11-21 at 19:56 +0000, Mark Jenkinson wrote:
>> Hi,
>>
>> You can see from the errors near the beginning of the file
>> that your version of install is unhappy with the -p flag, which
>> it considers an illegal option. Therefore it is not installing
>> any of the libraries, and hence the disastrous results.
>>
>> So you need to edit the file
>> $FSLDIR/config/$FSLMACHTYPE/systemvars.mk
>> and find the line that defines the variable INSTALL.
>> You will then need to remove the -p option from this
>> and insert whatever the nearest equivalent option is
>> (if one exists). It is used, on most systems, to preserve
>> the modification time. This isn't essential if you
>> can't find an equivalent option in install (or ginstall
>> if you have that) but it is nicer if you can find something.
>>
>> Let us know how you get on.
>> All the best,
>> Mark
>>
>>
>> On 21 Nov 2006, at 18:55, Christopher J Cieply wrote:
>>
>>> Mark
>>> Thanks for the help. It no builds some successfully but still
> fails.
>>> Any other thoughts would be appreciated. Couldn't attach the whole
>>> build log because it said the file was too large but below is the
>>> beginning and end of the file. Thank you very much once again.
>>>
>>> Chris
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