Hi
You can either use " fslmeants --showall " to get data into a text file that you can then load in matlab.
Alternatively, you can use the "read_avw" method in matlab (addpath /usr/local/fsl/etc/matlab) and read the fdt_paths file directly in matlab.
Cheers
Saad
On 3 Jul 2012, at 23:58, Soyoung Park wrote:
> Hi,
>
> I would like to statistically compare tractography results from different areas of the same diffusion image, and am wondering if there's a way to export the coordinate and intensity value of each voxel in the tractography data (fdt_paths) to MATLAB, so that I can easily access and manipulate them. Also, if there is a good, alternative method of tract comparison that I'm not aware of, I'd really appreciate suggestions.
>
> Thanks in advance!
>
> -Soyoung
--
Saad Jbabdi
University of Oxford, FMRIB Centre
JR Hospital, Headington, OX3 9DU, UK
(+44)1865-222466 (fax 717)
www.fmrib.ox.ac.uk/~saad
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