Hi - you can do that in Chimera, for example. But the correlation number won't mean much.
Cheers
-----Original Message-----
From: Collaborative Computational Project in Electron cryo-Microscopy <[log in to unmask]> On Behalf Of Si Hoon Park
Sent: Tuesday, 28 June 2022 10:03
To: [log in to unmask]
Subject: [ccpem] Atomic model fitting in cryoET map
Dear CCPEM community,
Thank you for all your efforts in the field of structural biology.
I would like to ask you about how to fit the model into a low resolution map.
I've got an electron density map of the protein oligomer on the lipid bilayer at ~25 A resolution.
Although the resolution was low, the shape of both proteins and lipid bilayer were distinct in plain sight. Therefore, I was able to fit the model into the map manually. Is there a way to calculate the correlation coefficient between the model and map? Or, Could I fit the model into the low resolution map automatically?
Sincerely,
Si Hoon Park
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