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LISTSERV Web Interface 16.52024-03-07T20:11:54ZPaul Emsley2024-03-07T20:11:12+00:002024-03-07T20:11:12+00:00Re: I found that downloaded cif file from RCSB has some issues in coot program.https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=COOT;dfe3588d.2403On 07/03/2024 07:18, 신진우(생명과학과) wrote:<br>><br>> CAUTION: This email originated from outside of the LMB:<br>> *.-owner-coot@JISCMAIL.AC.UK-.*<br>> Do not click links or open attachments unless you recognize the sender<br>> and know the content is safe.<br>> If you think this is a phishing email, please forward it to<br>> phishing@mrc-lmb.cam.ac.uk<br>><br>> Dear Coot,<br>><br>> Hello. My name is Jinwoo Shin. I'm a structural biologist in South Korea.<br>><br>> I am deeply grateful to your service for developing coot program.<br>><br>> I have a question.<br>><br>> I recently deposited a cryo-EM structure to [...]신진우(생명과학과)2024-03-07T07:18:06+00:002024-03-07T07:18:06+00:00I found that downloaded cif file from RCSB has some issues in coot program.https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=COOT;98d55a07.2403Dear Coot,<br><br>Hello. My name is Jinwoo Shin. I'm a structural biologist in South Korea.<br>I am deeply grateful to your service for developing coot program.<br><br>I have a question.<br><br>I recently deposited a cryo-EM structure to RCSB (PDB: 8IEP, https://www.rcsb.org/structure/8IEP). I found that downloaded cif file from RCSB has some issues in coot program.<br>By using color by atom mode, there is no issue.<br>However, by using color by chain mode, it is shown that the backbone of structure is broken. (please see the attached pictures)<br>Also, by using Ca/Backbone mode, only atoms are shown. (please see the attached [...]Bernhard Lohkamp2024-02-27T20:12:01+00:002024-02-27T20:12:01+00:00Re: Release 1.1.04https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=COOT;35a8df0e.2402I have put together a WinCoot 1.1.07 beta release:<br><br>https://github.com/bernhardcl/coot/releases/tag/Release-1.1.07<br><br>There is no installer as yet but easy enough to run: just unzip and double click wincoot.bat.<br><br>Please let me know if you encounter any issues (beyond the ones already known).<br><br>Cheers,<br><br>Bernhard