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CCPEM List Archives2024-03-19T10:43:41ZPowered by L-Soft's LISTSERV mailing list manager
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http://www.lsoft.com/images/listserv_small.gifRe: Collect data from Lacey grids - Falcon3
https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=CCPEM;7732a619.2403
Hi Gabriela,<br><br>What version of EPU do you have?<br>Because I think that for many versions of EPU you could choose lacey.<br><br>Yehuda<br><br>From: Collaborative Computational Project in Electron cryo-Microscopy <CCPEM@JISCMAIL.AC.UK> on behalf of Gabriela Dias Noske <0000c27dfdf52b71-dmarc-request@JISCMAIL.AC.UK><br>Date: Tuesday, 19 March 2024 at 10:13<br>To: CCPEM@JISCMAIL.AC.UK <CCPEM@JISCMAIL.AC.UK><br>Subject: [ccpem] Collect data from Lacey grids - Falcon3 [...]
2024-03-19T10:33:33+00:00Yehuda Halfonhttps://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=CCPEM;7732a619.2403Collect data from Lacey grids - Falcon3
https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=CCPEM;d5d79363.2403
Dear all,<br><br>We aim to collect data from a Lacey carbon grid, and unfortunately our EPU<br>version only allows Quantifoil grids for automated data collection.<br><br>Since we don't need many movies, we considered collecting data manually,<br>however, either using TIA or EPU we could only save the aligned sum instead<br>of the stack file. Does anyone know how we can save a movie from Falcon3<br>from manual data collection? or any other suggestion for how to collect<br>data from Lacey grids would help a lot. [...]
2024-03-19T07:12:10-03:00Gabriela Dias Noskehttps://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=CCPEM;d5d79363.2403Re: Issue with relion Tomo Picking (global key)
https://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=CCPEM;941655e8.2403
Hi Sjors,<br><br>Thanks a lot this did fix the issue. We did indeed not update the Conda environement as the environement.yml didn’t change in the last 4 months but we overlooked that it still pulls new things in the repo. Sorry for this.<br><br>Thanks a lot for the swift help.<br><br>Best,<br><br>David<br><br>From: Sjors Scheres <scheres@mrc-lmb.cam.ac.uk><br>Date: Monday, 18. March 2024 at 15:35<br>To: Haselbach,David <david.haselbach@IMP.AC.AT>, CCPEM@JISCMAIL.AC.UK <CCPEM@JISCMAIL.AC.UK><br>Subject: Re: [ccpem] Issue with relion Tomo Picking (global key) [...]
2024-03-19T08:35:38+00:00Haselbach,Davidhttps://www.jiscmail.ac.uk/cgi-bin/wa-jisc.exe?A2=CCPEM;941655e8.2403