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Hi Kevin,

Since CCP4 v.7 there is an issue with the term Windows. I was used to run any CCP4 program from anywhere on my disks with v. 6.x but with v.7x you have to move every needed fiies to C:\CCP4\ccp4-7.0 (or something like this): Indeed where the shortcut of the CCP4 consol is located.

Some environment variables are not well set. Hum... I have to confess I wanted to do that during some spare time. The trouble is I never found spare time since the v.7.0 release...

HTH and all the best,
Philippe


Philippe BENAS, Ph.D.

ARN UPR 9002 CNRS
IBMC Strasbourg
15, rue René Descartes
F-67084 STRASBOURG cedex
+33.3.8841.7109

E-mails: [log in to unmask], [log in to unmask]
URLs:   http://www-ibmc.u-strasbg.fr/ , http://www-ibmc.u-strasbg.fr/spip-arn/




--------------------------------------------
En date de : Mer 13.2.19, Kevin Cowtan <[log in to unmask]> a écrit :

 Objet: [ccp4bb] Can anyone run refmac from the WINDOWS command prompt?
 À: [log in to unmask]
 Date: Mercredi 13 février 2019, 12h29
 
 Hi! Can anyone run refmac from the
 WINDOWS command prompt?
 I've been experimenting with
 various combinations of environment variables, but I always
 get an error. The one instance of this error on google is an
 unanswered CCP4BB question.
 Dictionary path has not
 been definedCheck the environment
 variable CLIBD_MONCurrent value of
 CLIBD_MON is
 C:\Apps\CCP4-7\7.0\lib\data\monomersIt should be set to wherever_dict/dic/===> Error: Wrong path for the dictionary
 files<B><FONT
 COLOR="#FF0000"><!--SUMMARY_BEGIN--> Refmac:  Wrong path for the dictionary
 files Refmac:  Wrong path for the
 dictionary files
 The directory
 C:\Apps\CCP4-7\7.0\lib\data\monomers
 contains the following:
  Directory of
 C:\Apps\CCP4-7\7.0\lib\data\monomers
 12/02/2019  15:42    <DIR>         
 .12/02/2019  15:42    <DIR>       
   ..12/02/2019  15:38    <DIR>     
     012/02/2019  15:39    <DIR>   
       112/02/2019  15:39    <DIR> 
         212/02/2019  15:39   
 <DIR>          312/02/2019  15:39 
   <DIR>          412/02/2019 
 15:39    <DIR>         
 512/02/2019  15:39    <DIR>       
   612/02/2019  15:39    <DIR>     
     712/02/2019  15:40    <DIR>   
       812/02/2019  15:40    <DIR> 
         912/02/2019  15:40   
 <DIR>          a12/02/2019  15:40 
   <DIR>          b12/02/2019 
 15:40    <DIR>         
 c28/11/2016  21:43             7,640
 COPYING12/02/2019  15:40    <DIR>   
       d28/11/2016  21:43           
  3,553 dnarna_basepairs.txt28/11/2016  21:43 
            3,553
 dnarna_basepairs_2.txt28/11/2016  21:43     
        5,248 dnarna_params.txt12/02/2019 
 15:40    <DIR>         
 e27/04/2018  10:59           105,193
 ener_lib.cif28/11/2016  23:06         
  105,136 ener_one_lib.cif12/02/2019  15:40   
 <DIR>          f12/02/2019  15:40 
   <DIR>          g12/02/2019 
 15:41    <DIR>         
 h12/02/2019  15:41    <DIR>       
   i12/02/2019  15:41    <DIR>     
     j12/02/2019  15:41    <DIR>   
       k12/02/2019  15:41    <DIR> 
         l12/02/2019  15:41   
 <DIR>          list12/02/2019 
 15:41    <DIR>         
 m28/11/2016  21:43         1,372,146
 mon_lib_ind.cif28/11/2016  21:43       
  6,490,087 mon_lib_ind2.cif28/11/2016  23:06 
              120
 mon_lib_one_ind.cif28/11/2016  23:06       
        396 mon_lib_one_ind2.cif12/02/2019 
 15:41    <DIR>         
 n31/08/2018  15:52            35,312
 new_entries.txt31/08/2018  15:52         
   23,685 not_replaced_entries.txt12/02/2019 
 15:41    <DIR>         
 o12/02/2019  15:41    <DIR>       
   p28/11/2016  21:43         2,490,954
 pdb_alt_names.txt28/11/2016  21:43         
    7,794 pdb_v2to3.py12/02/2019  15:41   
 <DIR>          q12/02/2019  15:41 
   <DIR>          r31/08/2018 
 15:52            29,731
 replaced_entries.txt31/08/2018  15:52       
        754 revert_list.txt12/02/2019 
 15:41    <DIR>         
 s12/02/2019  15:42    <DIR>       
   t28/11/2016  21:43               557
 template_link.pdb12/02/2019  15:42   
 <DIR>          u12/02/2019  15:42 
   <DIR>          v12/02/2019 
 15:42    <DIR>         
 w31/08/2018  15:52                24
 windows_reserved_words.txt12/02/2019  15:42   
 <DIR>          x12/02/2019  15:42 
   <DIR>          y12/02/2019 
 15:42    <DIR>          z-- 
 Professor Kevin
 CowtanYork Structural Biology
 Laboratory / Department of Chemistry
 University of York, Heslington, York, YO10 5DD,
 UK
 https://www.york.ac.uk/chemistry/staff/academic/a-c/kcowtan/
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