Hi Qxjiang 

There are several script examples on the NIH Biowoulf website with very nice information on how relion  jobs scale too  specific to Slurm.

Sincerely

Joshua Lobo 

On Mon, Aug 6, 2018, 5:40 PM Jiang,Qiu-Xing <[log in to unmask]> wrote:

Dear all,   
The supercomputer on our campus uses SLURM to schedule GUI, CPU and GPU
nodes shared among users.  Our sys admin is seeking detailed information
on how to make the scheduler in Relion submit job requests the system
slurm directly and integrate it into our local environment. Is there a
detailed doc on this part? If some on this list has sorted out the slurm
part and is willing to share, I would really appreciate it.
Thanks.
Qiu-Xing


On 8/4/18, 1:20 AM, "3dem on behalf of Takanori Nakane"
<[log in to unmask] on behalf of [log in to unmask]> wrote:

>Hi,
>
>Unfortunately no.
>
>Technically speaking, one can write a script
>to parse MotionCor2 log files and produce STAR files.
>But this is very error prone and not officially supported.
>
>Best regards,
>
>Takanori Nakane
>
>On 2018/08/04 0:09, Elad Binshtein wrote:
>>>
>>> Hi all
>>
>> The Bayesian polishing in the new version of Relion3.0 required metadata
>> about the motion correction to be written out (within Relion).
>> Is there a way to get this done outside Relion?
>>
>> Thanks,
>>
>>>
>>
>>
>>
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