Dear Takanori,

Many thanks for your suggestion, although, to my knowledge, Relion 2.1.b1 should be a stable release of Relion. Also, another user of our cluster has successfully performed the job on the same Relion version; therefore I'm not sure this is the problem.
If anyone had another idea what could be the reason for the error message, please let me know.
One obvious difference between the successful and unsuccessful re-extraction, in case this might help, was the size of the dataset: the former was much smaller (c.a. 26k particles) than the latter (c.a. 619k particles).

Thanks again for your kind attention.

Yours,

Irene Vercellino

-----Original Message-----
From: Takanori Nakane [mailto:[log in to unmask]ac.uk]
Sent: Montag, 30. Juli 2018 16:34
To: Vercellino Irene (PSI)
Cc: [log in to unmask]
Subject: Re: [3dem] error message during particles re-extraction

Hi,

Why are you using a beta version of RELION 2.1?
Does it happen in the release version of 2.1?

Best regards,

Takanori Nakane

> Dear all,
>
> I am writing because I have a problem with particles extraction in Relion
> 2.1b1
> When I run an Extract job using the "re-extract refined particles" option,
> I get the following error message at the end of the job: "ERROR in
> appending metadata tables with not the same columns!".
> The job runs correctly if I don't use the re-extract option.
> Can anyone help me?
>
> Many thanks in advance.
>
> Best regards,
>
> Irene Vercellino
> _______________________________________________
> 3dem mailing list
> [log in to unmask]
> https://mail.ncmir.ucsd.edu/mailman/listinfo/3dem
>

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