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This file is a signal to the GUI that the pipeline has changed, hence it's not a symptom of a problem as such. I would advise that you do not use a beta-version for much else than testing, especially one that is nearly a year old. There has been many fixes since then, and I can see some that pertain to GUI and pipelines. Since you seems to have some level of corruption, it might not be fixed by updating, but it's nonetheless a good idea. /Björn On 2018-07-03 08:36, Eric Hanssen wrote: > > Hi Bjorn, > > Yes I am getting this when I start Relion, hence it actually doesn’t > start. > > I am using 2.1-beta1. > > I just noticed that there is .pipeline_has_changed file that I do not > have in any other project. I lost the content of the > default_pipeline.star last week (in the same hard drive crash) and > re-created it from the last job I run following Joshua’s > recommendation. I did this for several other project and they are all > fine and do not have the .pipeline_has_changed file. > > Regards > > Eric > > *-----------------* > > *Assoc. Prof Eric Hanssen* > > ** > > *Head - Advanced Microscopy Facility *** > > *Honorary Principal Fellow – Department of Biochemistry and Molecular > Biology* > > > Bio21 Molecular Science and Biotechnology Institute > 30 Flemington Road - The University of Melbourne - Victoria 3010 - > Australia > email: [log in to unmask] <mailto:[log in to unmask]>| > Office: +61 3 83442449 | Microscope: +61 3 83442509 > > Web: www.microscopy.unimelb.edu.au <http://www.microscopy.unimelb.edu.au/> > > qqwd > > *From:*Collaborative Computational Project in Electron cryo-Microscopy > [mailto:[log in to unmask]] *On Behalf Of *Bjoern Forsberg > *Sent:* Tuesday, 3 July 2018 4:31 PM > *To:* [log in to unmask] > *Subject:* Re: [ccpem] error > > This is often due to using a flag that should be followed by a number, > but isn't. But you are getting this when you start up relion? In that > case it sounds like a corrupt pipeline. I can't match line 120 to the > current version or relion, which version are you using? > > /Björn > > On 2018-07-03 06:23, Eric Hanssen wrote: > > Hi all, > > After a weird drive crash from last week. all of my projects are > back online. However there is one folder I cannot start relion > from. The prompt gives me this message: > > ERROR: > > Error in textToFloat > > File: /root/relion/src/strings.ccp line: 180 > > Thoughts? > regards > > Eric > > *-----------------* > > *Assoc. Prof Eric Hanssen* > > ** > > *Head - Advanced Microscopy Facility * > > *Honorary Principal Fellow – Department of Biochemistry and > Molecular Biology* > > > Bio21 Molecular Science and Biotechnology Institute > 30 Flemington Road - The University of Melbourne - Victoria 3010 - > Australia > email: [log in to unmask] <mailto:[log in to unmask]>| > Office: +61 3 83442449 | Microscope: +61 3 83442509 > > Web: www.microscopy.unimelb.edu.au > <http://www.microscopy.unimelb.edu.au/> > > qqwd > > ------------------------------------------------------------------------ > > To unsubscribe from the CCPEM list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1 > > ------------------------------------------------------------------------ > > To unsubscribe from the CCPEM list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1 > ######################################################################## To unsubscribe from the CCPEM list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1