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Hi Dr Grimm In Addition to everyones suggestions using modules ( if you don't have it setup already ) to load and unload the different cuda libraries is a clean solution Sincerely Joshua Lobo On Tue, Jun 12, 2018, 10:26 AM Takanori Nakane <[log in to unmask]> wrote: > Hi Clemens, > > > Another problem we ran into was that the EMAN2 installation interferes > > with the compilation of Relion2 by installing conflicting FFTW > > libraries. > > You can specify "-DFORCE_OWN_FFTW=ON" in cmake to build > a verified version of FFTW for RELION and link against it. > Same for FLTK (-DFORCE_OWN_FLTK=ON). > > I always do this to avoid library problems. > > Best regards, > > Takanori Nakane > > > Dear All, > > > > we are currently setting up a Linux machine with two Nvidia cards and > > Cuda for Relion2 and Eman2, CCPEM etc. > > > > After several tries with the current versions of CentOS 7 and Ubuntu > > and recent versions of the Cuda toolbox (9.2, 9.1), we had to find out > > that there are various dependencies and incompatibilities of what > > binaries are available for the different Cuda versions, what can be > > installed alongside and what Cuda versions enable a successful > > compilation in particular of Relion2. > > > > Another problem we ran into was that the EMAN2 installation interferes > > with the compilation of Relion2 by installing conflicting FFTW > > libraries. > > > > The Liao lab has published a very helpful and comprehensive protocol > > to setup a linux box under Ubuntu 14. However, this distribution will > > reach its end of life in less than a year. > > > > It would be great if colleagues would be willing to share their > > current configuration and experiences as of what Linux distribution > > and what Cuda version(s) they use with the different software > > packages, and whether different Cuda versions can be used successfully > > alongside. > > > > Thanks, > > Clemens > > > > -------------------------------------------------- > > Dr. Clemens Grimm > > Institut für Biochemie > > Biozentrum der Universität Würzburg > > Am Hubland > > D-97074 Würzburg > > Germany > > e-mail: [log in to unmask] > > phone : +49 0931 31 84031 > > ------------------------------------------------- > > > > ######################################################################## > > > > To unsubscribe from the CCPEM list, click the following link: > > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1 > > > > ######################################################################## > > To unsubscribe from the CCPEM list, click the following link: > https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1 > ######################################################################## To unsubscribe from the CCPEM list, click the following link: https://www.jiscmail.ac.uk/cgi-bin/webadmin?SUBED1=CCPEM&A=1