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Eugene, I agree that I should try to reinstall FSL. Do I need to un-install the version that I am currently running first. If so, how is this accomplished (I have not seen any documentation on this anywhere) thanks, karen On Mon, May 7, 2018 at 3:57 PM, Eugene Duff <[log in to unmask]> wrote: > Hi Karen - > > fslpython should be installed with a standard install of FSL using the > fslinstaller.py script available from the download page. Did you notice any > errors on installation? Was there enough disk space? > > I think it might be worth trying to reinstall FSL (you can use the same > fslinstaller you downloaded previously). > > Best > > Eugene > > On 7 May 2018 at 18:59, Karen Seymour <[log in to unmask]> wrote: > >> Details: >> >> installation was complete on 5/4/18 using the python installer downloaded >> from website: https://fsl.fmrib.ox.ac.uk/fsl/fslwiki/FslInstallat >> ion#Availability_of_FSL >> >> program was installed on MacBook Pro (OS Sierra 10.12.6) >> >> When installation was tested echo $FSLDIR the correct directory was >> displayed and path check yielded: flirt version 6.0 >> >> Please let me know if other details are required. >> >> ks >> >> On Mon, May 7, 2018 at 12:50 PM, Eugene Duff <[log in to unmask]> >> wrote: >> >>> Hi Karen - >>> >>> You need to give details of your installation - what type of machine are >>> you using and how did you install? These missing files should be available >>> with a standard, reasonably up to date version of FSL. >>> >>> >>> Eugene >>> >>> On 7 May 2018 at 16:36, Karen Seymour <[log in to unmask]> wrote: >>> >>>> I am a new FSL user and I am trying to run epi_reg, but I keep getting >>>> an error message that /usr/local/fsl/bin/imglob: No such file or directory. >>>> I have looked at the Archives and it appears I may be missing some files. >>>> In prior posts, I also saw that I should have a folder called fslpython in >>>> $FSLDIR, but that appears to be missing as well (I have 'python' folder >>>> with subfolder 'mist', but no fslpython folder). How do I get these >>>> folders/files? Any help would be appreciated. >>>> >>>> Karen Seymour >>>> >>> >>> >> >