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Hi Mark,

thanks for the fast answer! The problem is, autoaq is using atlasquery, too, so the same segmentation faults are happening here.
And, the problem existed with the pre-FSLeyes version, too. I hoped, an update would solve it, but it seems to be a more severe issue.
Could there be an incompatibility of the dynlibs used by atlasquery? Version problems in QT or associated libraries?

Best,
Martin

2017-08-22 11:47 GMT+02:00 Mark Jenkinson <[log in to unmask]>:
Hi,

Others have also reported this and it seems to be related to the change from FSLView to FSLeyes.  I recommend that you try the new tool autoaq - as that should do what you need with masks.  If you want to use a coordinate, then just prepare an input mask for that with std2imgcoord and fslmaths with the -roi option (or use FSLeyes interactively).

All the best,
        Mark


> On 22 Aug 2017, at 10:26, Martin Domin <[log in to unmask]> wrote:
>
> Hello,
>
> as the subject already mentions the problem, I'm getting a segmentation fault during the use of atlasquery. It happens during the query step, not while e.g. requesting the available atlases.
> I'm working on a MacPro, 10.10.5 (Yosemite) with the most current version of FSL (updated yesterday) - build 416.
>
> Are there perhaps any ideas that could help identifying the cause? Thank you in advance!
>
> Best,
> Martin