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Dear Lukasz
Thank you so much for your kindness.

I have used the fslreorient2std tool as you said, but it did not change.
I am sorry to trouble you, but please teach me if you can.
Please take a look at the attached file.
As shown in the figure, the image after preprocessing is reversed upside
down, the front and back are also reversed, and rotated 90 degrees
clockwise.
Please let me know if you know the tool or method to change the direction
or coordinate axis, or to rotate the image.

Best regards
Tsuyoshi Hashimoto

2017-04-10 20:58 GMT+09:00 Lukasz L. Bobinski <[log in to unmask]>:

> Try fslreorient2std to reorient your images to standard space.
> Best wishes,
> Lukasz
>



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