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Thank You! Is this done for single-level analysis and carried on through to group-level? Thanks, Aaron On Tue, Apr 11, 2017 at 8:39 AM, Mark Jenkinson < [log in to unmask]> wrote: > Hi, > > If you are doing task fMRI and using FEAT then you can enter an ROI mask > using the "Pre-threshold masking" option in the Post-stats tab. That will > then perform an appropriate ROI analysis. > > All the best, > Mark > > > > > On 9 Apr 2017, at 17:28, Ben Mansel <[log in to unmask]> wrote: > > > > Hello > > > > Quite new to FSL so apologies for the silly questions. > > > > In my experiment, I am not interested in the whole brian. Rather, I am > interested in one particular area. > > > > I am not sure how to conduct an ROI however. I know how to use FeatQuery > - but I'm confused about where this analysis should be done. > > > > Following first-level analysis, do I conduct an ROI analysis through > FeatQuery for each individual subject, followed by group analysis? > > > > Any help is appreciated. I am only looking for a simplified step-by-step > process. >