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Hi - the FEEDS RUN script turns off calling SGE_ROOT internally - but you should still be able to submit the RUN script as a whole to SGE using fsl_sub - this will then run on a single cluster node.

Cheer.s


On 8 Apr 2013, at 19:51, Trevor Cooper <[log in to unmask]> wrote:

The current behaviour of FEEDS is to disable SGE queuing by un-setting the SGE_ROOT environment variable as FEEDS apparently expects the tests to NOT be queued.

In contrast to previous posts found in the archives I would like to test a FSL installation on a Rocks cluster using FEEDS or a similar package of standardized scripts/data.

Does a separate set of test scripts/data exist that can be used to explicitly test FSL in a clustered environment? Does anybody have recommended tweeks to FEEDS to make it SGE compatible?

Thanks,
Trevor



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