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Thanks Saad.  I will run overnight and let you know the results.  I'm not using SGE.
-Laura
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Laura Danielian
Biomedical Engineer
National Institutes of Health
Building 10 CRC Room 7-5753
Bethesda, MD 20892
301-496-2168


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From: Saad Jbabdi <[log in to unmask]>
Reply-To: FSL - FMRIB's Software Library <[log in to unmask]>
Date: Wed, 19 Aug 2009 09:36:34 -0400
To: <[log in to unmask]>
Conversation: [FSL] bedpostx error
Subject: Re: [FSL] bedpostx error

Hi Laura,

Are you using parallel or serial processing? (i.e. is the SGE_ROOT
environment variable set?).

Can you use this script instead (on clean subject directories) and
tell me what happens?

Cheers,
Saad.