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Hi,
 
just do 
 
flirt -in image_A -ref image_B -omat A2B.mat
 
and change whatever defaults you want to adjust opr whatever additional options you may want to use (type the "flirt" command in the terminal to get the usage).
 
Cheers-
Andreas

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Von: FSL - FMRIB's Software Library im Auftrag von Buyean Lee
Gesendet: So 01.03.2009 17:20
An: [log in to unmask]
Betreff: [FSL] Flirt question


Dear FSL users,

In SPM5, I can find a transformation matrix for spatial normalization of an image_A coregistered to an image_B without reslicing the image_A.

Would someone please let me know how to do the same operation with Flirt?
I have very limited experience in FSL (I don't know what search word would be the best for this question).

Thank you,

Buyean



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